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Line 1498 (in total in 110 total lines/rows) the correct_term column contains the rank instead of the OMIM. Phenopackets seem fine (although older versions may have had bugs). I suspect this issue to be in some measure in all output we have.
Probably some issue here or somewhere farther below:
For example in:
https://github.com/monarch-initiative/pheval.llm/blob/main/out_openAI_models/multimodel/gpt-4o/full_df_results.tsv
Line 1498 (in total in 110 total lines/rows) the correct_term column contains the rank instead of the OMIM. Phenopackets seem fine (although older versions may have had bugs). I suspect this issue to be in some measure in all output we have.
Probably some issue here or somewhere farther below:
pheval.llm/src/malco/post_process/ranking_utils.py
Line 81 in 5265eb3
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