Merge pull request lh3#32 from mmoisse/patch-1

Update example Illumina paired-end reads
mmokrejs · Sep 16, 2014 · 41b137d · 41b137d
2 parents c7679ee + dfd8c9e
commit 41b137d
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/README.md b/README.md
@@ -87,7 +87,7 @@ settings:
 * Illumina paired-end reads no longer than ~70bp:
 
 		bwa aln ref.fa read1.fq > read1.sai; bwa aln ref.fa read2.fq > read2.sai
-		bwa samse ref.fa reads.sai reads.fq > aln-pe.sam
+		bwa sampe ref.fa reads1.sai reads2.sai reads1.fq reads2.fq > aln-pe.sam
 
 * PacBio subreads to a reference genome: