Bioinformatics engineer at the LabEx Cortex single cell/ spatial transcriptomics plateform
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Bioinformatics platform of LabEx Cortex
- Université Claude Bernard Lyon 1 Faculté de Médecine - 8, Avenue Rockefeller 4e étage Couloir AB 69008 Lyon FRANCE
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HybridGenomeMaker Public
This script generates a FASTA and GTF file for an exogenous nucleotide sequence (not present in the reference genome). Then, it integrates this sequence into the reference FASTA and GTF files of a …
Shell GNU General Public License v3.0 UpdatedFeb 27, 2025 -
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cellxgene Public
Forked from chanzuckerberg/cellxgeneAn interactive explorer for single-cell transcriptomics data
JavaScript MIT License UpdatedOct 6, 2023 -
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cell2location Public
Forked from BayraktarLab/cell2locationComprehensive mapping of tissue cell architecture via integrated single cell and spatial transcriptomics (cell2location model)
Python Apache License 2.0 UpdatedJul 14, 2022