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Octopus 0.7.1
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@dancooke dancooke released this 03 Mar 13:40
· 94 commits to master since this release
v0.7.1
e0bbc37

This is a minor bug fix release:

  • Fixes underreporting of de novo mutations in trio mode [7d195de].
  • Improves QUAL precision for trio calls [b68c7cf].
  • Resolves some issues with read counting (e.g. AD) on * alleles [e0023ad].
  • Fixes underreporting of more than one somatic haplotype in cancer mode [0c7d06b].
  • Improves coalescent model to allow 2 indel heterozygosity parameters along a haplotype [58db934].
  • Adds timestamp to VCF output [36ca0b9].
  • Adds --architecture option to install.py that sets compiler march option [87faea9].
  • Default minimum mapping quality filter set to 5.
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