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Release run_dbcan 3.0

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@HaidYi HaidYi released this 21 Dec 20:30
· 233 commits to master since this release

Update Info

  • V3.0.2 please use pip install dbcan==3.0.2 for update
    • Added eCAMI tool, remove Hotpep from run_dbCAN;
    • Changed the format of cgc.out to make it easy to read;
    • Fixed ‘-t all’ will cause the program to generate empty files.
    • Updated CAZy db for Diamond and HMMER DB for HMMER.
    • Re-arranged the code. The command line is run_dbcan without the suffix .py. Please check the command lines below.
    • The database files under db folder is now hosted through Git-LFS. To download the complete db files, please use the command git lfs pull (Note: To use git lfs, please check the installation guide at https://git-lfs.github.com/).
    • Docker file is updated and we simplify the installation step.
    • Fix the bug of the file path.