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1. Ensembl-ID-Match Ensembl-ID-Match Public

   This script takes outdated Ensembl IDs (this case from Rnor6.0 version 80) and spits out the gene symbol and updated Ensemble IDs if available.

   R

2. ClusterAnalyses ClusterAnalyses Public

   Include PCAs, UMAPs, tSNEs for gene/protein expression analyses

   R

3. Visualizations Visualizations Public

   For all gene expression visualization plots. Volcano, violin, pdfs, heatmaps, etc.

   R

4. CellDecon CellDecon Public

   Cell deconvolution/enrichment code

   R

5. FileConversions FileConversions Public

   Any scripts that convert/extract/manipulate file types

   ImageJ Macro

6. GeneOrganizing GeneOrganizing Public

   Code for manipulating, renaming, organizing gene names or datasets

   R