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QOL Fixes for RE NS#32

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VGFletcher wants to merge 2 commits intolibAtoms:replica_exchangefrom
VGFletcher:replica_exchange
Open

QOL Fixes for RE NS#32
VGFletcher wants to merge 2 commits intolibAtoms:replica_exchangefrom
VGFletcher:replica_exchange

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@VGFletcher
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Removed the argument to create directories and just create directories.
Removed the requirement for MC_cell_P when doing RE NS.

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