update spiner, try to fix CI

lanl · Dec 8, 2023 · 95905d1 · 95905d1
1 parent a34e356
commit 95905d1
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Showing 2 changed files with 5 additions and 3 deletions.
diff --git a/.github/workflows/tests.yml b/.github/workflows/tests.yml
@@ -13,13 +13,15 @@ jobs:
 
       steps:
         - name: Checkout code
-          uses: actions/checkout@v2
+          uses: actions/checkout@v3
           with:
             submodules: true
         - name: Set system to non-interactive mode
           run: export DEBIAN_FRONTEND=noninteractive
         - name: install dependencies
-          run: sudo apt-get install -y --force-yes -qq build-essential libhdf5-serial-dev
+          run: |
+            sudo apt-get update -y -qq
+            sudo apt-get install -y --force-yes -qq build-essential libhdf5-serial-dev
         - name: build and run tests
           run: |
             mkdir -p bin

diff --git a/utils/spiner b/utils/spiner
+2 −1		.github/PULL_REQUEST_TEMPLATE.md
+46 −0		.github/workflows/deps.yml
+40 −0		.github/workflows/docs.yml
+24 −0		.github/workflows/formatting.yml
+36 −0		.github/workflows/install.yml
+11 −6		.github/workflows/tests.yml
+5 −0		.gitignore
+157 −0		.gitlab-ci.yml
+5 −0		.gitlab-ci/config/spack/upstreams.yaml
+3 −4		.gitmodules
+213 −0		CMakeLists.txt
+0 −1		Catch2
+93 −32		README.md
+66 −0		cmake/Format.cmake
+232 −0		cmake/content.cmake
+22 −0		cmake/spinerConfig.cmake.in
+10 −0		doc/index.html
+1 −0		doc/sphinx/.gitignore
+27 −0		doc/sphinx/Makefile
+3 −0		doc/sphinx/README
+1 −0		doc/sphinx/_static/placeholder
+27 −0		doc/sphinx/_templates/versions.html
+57 −0		doc/sphinx/conf.py
+68 −0		doc/sphinx/index.rst
+35 −0		doc/sphinx/make.bat
+93 −0		doc/sphinx/src/building.rst
+503 −0		doc/sphinx/src/databox.rst
+54 −0		doc/sphinx/src/getting-started.rst
+178 −0		doc/sphinx/src/interpolation.rst
+102 −0		doc/sphinx/src/sphinx-howto.rst
+70 −0		doc/sphinx/src/statement-of-need.rst
+ −		figs/spiner_interpolation_benchmark.png
+1 −0		installtest/.gitignore
+43 −0		installtest/CMakeLists.txt
+7 −0		installtest/libtest.cpp
+0 −79		ports-of-call/README.md
+0 −232		ports-of-call/portability.hpp
+0 −492		ports-of-call/portable_arrays.hpp
+50 −0		spack-repo/packages/ports-of-call/package.py
+106 −0		spack-repo/packages/spiner/package.py
+6 −0		spack-repo/repo.yaml
+206 −162		spiner/databox.hpp
+21 −0		spiner/interpolation.hpp
+221 −0		spiner/piecewise_grid_1d.hpp
+57 −34		spiner/regular_grid_1d.hpp
+5 −0		spiner/sp5.hpp
+0 −0		spiner/spiner_types.hpp
+112 −0		test/CMakeLists.txt
+0 −71		test/Makefile
+0 −78		test/Makefile.kokkos
+135 −0		test/benchmark.cpp
+8 −7		test/convergence.cpp
+7 −9		test/plot_convergence.py
+196 −22		test/test.cpp