Code

Add MOCMC#80

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brryan merged 150 commits intomainlanl/phoebus:mainfrom brryan/add_mocmclanl/phoebus:brryan/add_mocmcCopy head branch name to clipboardJun 8, 2022

+4,960-1,888

Commits

Commits on Feb 18, 2022

• First cut

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  322c6dd

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• Merge remote-tracking branch 'origin/main' into brryan/add_mocmc

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Commits on Feb 22, 2022

• Cleanup

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Commits on Feb 23, 2022

• Working on packing tilPi and sending it around

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• Runs radiation_advection

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Commits on Mar 1, 2022

• backing up

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Commits on Mar 2, 2022

• Working on MOCMC, about to try fixing Mesh swarm BCs

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Commits on Mar 3, 2022

• Refining

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Commits on Mar 5, 2022

• Working on MOCMC

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Commits on Mar 6, 2022

• Prepared for pij calc

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• Fix species indexing on itil

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Commits on Mar 7, 2022

• Add transport to mocmc particles

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• Working

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Commits on Mar 8, 2022

• Merge remote-tracking branch 'origin' into brryan/add_mocmc

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• Merge branch 'brryan/add_mocmc' of github.com:lanl/phoebus into brryan/add_mocmc

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• adding code to assign samples a dOmega and compute eddington

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• normalize the 2nd moment

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• normalize the 2nd moment right

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• Make particle sampling work

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• new singularity opac

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Commits on Mar 9, 2022

• Working

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• About to merge in jdolence recon changes

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• Merge branch 'brryan/add_mocmc' into jdolence/mocmc_edd

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• Merge pull request #87 from lanl/jdolence/mocmc_edd

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• Compiles and runs

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  committed
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• opacity averaging

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• First cut of MOCMC residual

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• 2D rootfind :(

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Commits on Mar 10, 2022

• Actually initialize samples with thermal values

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• Working on rootfind

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Commits on Mar 14, 2022

• working

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Commits on Mar 15, 2022

• Add script for getting 0D thermalization solutions

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Commits on Mar 16, 2022

• Add pre-timestep boundary communication

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• Merge remote-tracking branch 'origin/brryan/add_mocmc' into brryan/add_mocmc

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Commits on Mar 22, 2022

• Working out how to deal with ispec issue

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  committed
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• Bizarre error with c2p right now

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Commits on Mar 23, 2022

• compiles

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  committed
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• Cleaned up comments

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• Formatting

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• Weird git error

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• Merge remote-tracking branch 'origin/main' into brryan/add_mocmc

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• Real version of parthenon

  brryan

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• Working to solve my bvals bug

  brryan

  committed
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• submodule

  brryan

  committed
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• Add lfroberts suggestion for inherited type checking

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  committed
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• change loop pattern

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• Formatting

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Commits on Mar 24, 2022

• Removed EDDINGTON_KNOWN as a template parameter

  brryan

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• Update parthenon

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Commits on Apr 5, 2022

• merge

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Commits on Apr 6, 2022

• Remove print statements

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  committed
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• A bit of progress in mocmc interactions

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  committed
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• cleanup

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  committed
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Commits on Apr 7, 2022

• Merge remote-tracking branch 'origin/main' into brryan/add_mocmc

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• Scattering working

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• Integrate over frequency correctly

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Commits on Apr 11, 2022

• old version

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  committed
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• Merge remote-tracking branch 'origin/brryan/add_mocmc' into brryan/add_mocmc

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• Interpolating intensities properly

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Commits on Apr 12, 2022

• Working on mocmc

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• Update singularity-opac

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Commits on Apr 13, 2022

• Working on getting units right

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• Latest singularity-opac

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• About to clean up

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• Working on this

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Commits on Apr 14, 2022

• Merge remote-tracking branch 'origin' into brryan/add_mocmc

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• Merge branch 'brryan/add_mocmc' of github.com:lanl/phoebus into brryan/add_mocmc

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  4ff360c

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• Modifying units for adv test

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  committed
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• Workign

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  committed
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• moment method back to working

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• Working on this

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Commits on Apr 19, 2022

• Got units working

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• Add MOCMC particle counter

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• Formatting

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• Merge remote-tracking branch 'origin/main' into brryan/add_mocmc

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• Back to cfm12

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• Cleanup

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• Working on cleaning things up

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Commits on Apr 21, 2022

• Cleaning up

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• Working

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Commits on Apr 25, 2022

• Response to code review

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• Formatting

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• Formatting

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• Switch to GetFourVelocity

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Commits on Apr 28, 2022

• change intepr filename

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Commits on Apr 29, 2022

• Merge remote-tracking branch 'origin/main' into brryan/add_mocmc

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• Merge remote-tracking branch 'origin/jmm/lower-d-interp' into brryan/add_mocmc

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  committed
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• attempted fix

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• Merge remote-tracking branch 'origin/jmm/lower-d-interp' into brryan/add_mocmc

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• Merge remote-tracking branch 'origin/jmm/lower-d-interp' into brryan/add_mocmc

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• Merge remote-tracking branch 'origin/jmm/lower-d-interp' into brryan/add_mocmc

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• Merge remote-tracking branch 'origin/jmm/lower-d-interp' into brryan/add_mocmc

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• Merge remote-tracking branch 'origin/main' into brryan/add_mocmc

  brryan

  committed
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• Working on equilibration analysis

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  committed
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• copyright

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  committed
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Commits on May 2, 2022

• Working on consistent data reading

  brryan

  committed
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Commits on May 3, 2022

• Spin out phoebus package

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Commits on May 5, 2022

• Working on this

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  committed
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Commits on May 10, 2022

• Switch to mean opacities

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  committed
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• Formatting

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  committed
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Commits on May 12, 2022

• Switching to scalefree rad physics

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  committed
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• Trying to identify lack of energy conservation

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Commits on May 13, 2022

• Still trying to debug

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  committed
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Commits on May 16, 2022

• Merge remote-tracking branch 'origin/main' into brryan/add_mocmc

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  committed
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• MOCMC conserving atm

  brryan

  committed
  fe88c48

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• Found the line that breaks things

  brryan

  committed
  ff4ddde

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• Fix interpolation stencil issue

  brryan

  committed
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• Merge remote-tracking branch 'origin/brryan/add_mocmc' into brryan/add_mocmc

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  committed
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Commits on May 17, 2022

• fix phi domain bug

  brryan

  committed
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• Cleaned up print statements

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  committed
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• Plot_eq working for rad again

  brryan

  committed
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Commits on May 18, 2022

• wrong equilib temp

  brryan

  committed
  c0bccbd

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• Looks like phoebus is equilibrating to the wrong temperature

  brryan

  committed
  d2b04dd

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• MOCMC also works for eql test

  brryan

  committed
  a9f88c0

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• Add tests

  brryan

  committed
  6c633b0

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• Fix bugs and upgold

  brryan

  committed
  9ab55fa

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• Formatting

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  committed
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• Remove old debug code

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  committed
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• update CI

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• update CI

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Commits on May 19, 2022

• Fix bug with non-rad runs

  brryan

  committed
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• Some fixes from review comments

  brryan

  committed
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Commits on May 20, 2022

• Implement LFR approach to constant code_constants

  brryan

  committed
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• Fixed bug with nu units but MC still not working

  brryan

  committed
  8dcd543

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• still unclear why MC is broken

  brryan

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Commits on May 26, 2022

• backup

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  committed
  8f575cf

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• I think I fixed the bug

  brryan

  committed
  6087e45

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• About to move frequency unit conversion around

  brryan

  committed
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• Switched frequency around, upgolded

  brryan

  committed
  c5e43d6

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• Formatting

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• Merge remote-tracking branch 'origin/main' into brryan/add_mocmc

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Commits on May 27, 2022

• bad merge

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  committed
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Commits on May 31, 2022

• Move to latest parthenon brryan/TEMP_PHOEBUS_SUPPORT

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  committed
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• SetPrecise -> SetReal

  brryan

  committed
  b0e71d6

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• +/- issue I may have introduced recently

  brryan

  committed
  80fdb20

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• Make max frac error calc more robust

  brryan

  committed
  d5f8cb5

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• Update parthenon

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• upgold linear modes because of old setreal precision issue

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Commits on Jun 1, 2022

• Remove printfs

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Commits on Jun 3, 2022

• Don't output flux div for fluid if fluid isnt active

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• Merge remote-tracking branch 'origin/brryan/fix_rad_gpu' into brryan/add_mocmc

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  committed
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• Fix host/gpu issue and update to latest parth preview

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  committed
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• Merge remote-tracking branch 'origin/brryan/add_mocmc' into brryan/add_mocmc

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  committed
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• Actually update parthenon submodule

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  committed
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• Merge remote-tracking branch 'origin/brryan/add_mocmc' into brryan/add_mocmc

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  committed
  a379b1a

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• update TEMP_PHOEBUS

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  committed
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• Merge remote-tracking branch 'origin/brryan/add_mocmc' into brryan/add_mocmc

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  committed
  63699b5

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• Formatting

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Commits on Jun 8, 2022

• Remove printfs

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• Merge branch 'brryan/add_mocmc' of github.com:lanl/phoebus into brryan/add_mocmc

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