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forked from Ensembl/homebrew-external

Formulas hosted from the homebrew project from retired or third party repos with minor edits

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LICENSE
LICENSE
 
 
README.md
README.md
 
 
augustus.rb
augustus.rb
 
 
[email protected]
[email protected]
 
 
biopp.rb
biopp.rb
 
 
blast-240.rb
blast-240.rb
 
 
blast-281.rb
blast-281.rb
 
 
blast-legacy.rb
blast-legacy.rb
 
 
blast.rb
blast.rb
 
 
boost.rb
boost.rb
 
 
bowtie.rb
bowtie.rb
 
 
bwa-051mt.rb
bwa-051mt.rb
 
 
bwa-062.rb
bwa-062.rb
 
 
cd-hit.rb
cd-hit.rb
 
 
clustal-w.rb
clustal-w.rb
 
 
emboss.rb
emboss.rb
 
 
exonerate09.rb
exonerate09.rb
 
 
exonerate22.rb
exonerate22.rb
 
 
exonerate24.rb
exonerate24.rb
 
 
fasttree.rb
fasttree.rb
 
 
genewise.rb
genewise.rb
 
 
gmap-gsnap.rb
gmap-gsnap.rb
 
 
graphviz-238.rb
graphviz-238.rb
 
 
hisat2.rb
hisat2.rb
 
 
hmmer.rb
hmmer.rb
 
 
hmmer2.rb
hmmer2.rb
 
 
htslib131.rb
htslib131.rb
 
 
infernal.rb
infernal.rb
 
 
infernal10.rb
infernal10.rb
 
 
kalign.rb
kalign.rb
 
 
kent.rb
kent.rb
 
 
lastz.rb
lastz.rb
 
 
libbigwig.rb
libbigwig.rb
 
 
libpll.rb
libpll.rb
 
 
lp_solve.rb
lp_solve.rb
 
 
mafft.rb
mafft.rb
 
 
maker.rb
maker.rb
 
 
mash.rb
mash.rb
 
 
mcl.rb
mcl.rb
 
 
mir-prefer.rb
mir-prefer.rb
 
 
muscle.rb
muscle.rb
 
 
mysql-client.rb
mysql-client.rb
 
 
newick-utils.rb
newick-utils.rb
 
 
percona-client.rb
percona-client.rb
 
 
poa.rb
poa.rb
 
 
prank.rb
prank.rb
 
 
quicktree.rb
quicktree.rb
 
 
recon.rb
recon.rb
 
 
repeatmasker.rb
repeatmasker.rb
 
 
repeatmodeler.rb
repeatmodeler.rb
 
 
repeatscout.rb
repeatscout.rb
 
 
rmblast.rb
rmblast.rb
 
 
samtools131.rb
samtools131.rb
 
 
snap.rb
snap.rb
 
 
snoscan.rb
snoscan.rb
 
 
sratoolkit.rb
sratoolkit.rb
 
 
t-coffee.rb
t-coffee.rb
 
 
tophat.rb
tophat.rb
 
 
trf.rb
trf.rb
 
 
trimal.rb
trimal.rb
 
 
trnascan.rb
trnascan.rb
 
 
wiggletools.rb
wiggletools.rb
 
 

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Homebrew External

A collection of formulas from a range of external homebrew repositories. These formula have had minimal changes from their original or were based on external formulas. The main reason for this repository is to host a collection for formulas from the retired homebrew-science tap. These formula are intended to be used by the Ensembl project and its pipelines/processes.

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Formulas hosted from the homebrew project from retired or third party repos with minor edits

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