Function to appropriately rescale/crop predictions to match the test crops' resolutions, both before and after participant submissions. Should be called by package_submission() thus allowing participants to preview the results of the conversion, before submitting the data. Should work for both OME-NGFF metadata and classic metadata options.

[rhoadesScholar]

• Appropriately rescale/crop predictions to match the test crops
• Called by package_submission() (allowing participants to preview the results of the conversion before submitting)
• Called during volume scoring to ensure matching submitted data that wasn't prepared with package_submission().
• Should work for both OME-NGFF metadata and classic metadata options.

See

cellmap-segmentation-challenge/src/cellmap_segmentation_challenge/evaluate.py

Line 855 in acb7325

def match_crop_space(path, class_label, voxel_size, shape, translation) -> np.ndarray:

[rhoadesScholar]

Addressed in a51af03