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20231223 - computational notebook
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isaactpetersen committed Dec 24, 2023
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Expand Up @@ -216,7 +216,7 @@ There are numerous ways that researchers can make use of the OSF to advance the
Here is a template for a pre-registration of a study on the OSF:\index{open science}\index{Open Science Framework} https://osf.io/2hrfy.
Researchers can (pre-)register their study on the OSF by posting their hypotheses, study methods, and data analysis plan.\index{open science}\index{Open Science Framework}\index{preregistration}
In addition, researchers can use the OSF to post manuals, protocols, lab notebooks, data, data processing syntax, statistical analysis code, detailed results, computational notebooks, and paper preprints [@Tackett2019a].\index{open science}\index{Open Science Framework}
A computational notebook is a document in which the analysis code, output, and text are weaved together, so the reader can see how each statistical result was obtained for reproducibility.\index{open science}
A computational notebook (e.g., Jupyter notebook, R Markdown, Quarto) is a document in which the analysis code, output, and text are weaved together, so the reader can see how each statistical result was obtained for reproducibility.\index{open science}
An example of an R Markdown computational notebook is on the book's page on the OSF: https://osf.io/nkyve (the associated `.Rmd` file that generated the html is here:\index{open science}\index{Open Science Framework} https://osf.io/fxrzm).
An example of a Quarto computational notebook is also on the book's page on the OSF: https://osf.io/8ybtk (the associated `.qmd` file that generated the html is here:\index{open science}\index{Open Science Framework} https://osf.io/zbruf).

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