Skip to content

Issues: imagej/pyimagej

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

53 Open 202 Closed
53 Open 202 Closed
Author
Filter by author
Loading
Label
Filter by label
Loading
Use alt + click/return to exclude labels
or ⇧ + click/return for logical OR
Projects
Filter by project
Loading
Milestones
Filter by milestone
Loading
Assignee
Filter by who’s assigned
Sort
Sort by
Newest Oldest Most commented Least commented Recently updated Least recently updated Best match
Most reactions
👍 👎 😄 🎉 😕 ❤️ 🚀 👀

Issues list

Add ij.run_script signature that takes file paths enhancement New feature or request
#318 opened Oct 29, 2024 by hinerm
ij.py.run_script returns the wrong type
#316 opened Oct 22, 2024 by gselzer
1
Unsupported type: <java class 'net.imglib2.type.numeric.real.DoubleType'> in ij.py.from_java()
#314 opened Oct 14, 2024 by YunxiaoWangwww
3
Plugins in the plugin folder cannot be used if they are just .class files.
#313 opened Aug 19, 2024 by odinsbane
4
Arguments passed to run_plugin replace backslash with forward slash
#312 opened Aug 13, 2024 by matham
TypeError: 'NoneType' object is not callable when initializing imagej
#308 opened Jul 1, 2024 by belenal
5
Add dimension re-ordering support to to_dataset() method enhancement New feature or request
#304 opened May 10, 2024 by elevans
@elevans
1
Testing your installation - failed
#300 opened Mar 3, 2024 by danidean
Make interactive mode work on macOS
#298 opened Feb 13, 2024 by elevans
5
EXCEPTION_ACCESS_VIOLATION (0xc0000005) tech-support Need help to get things working
#297 opened Jan 24, 2024 by UserA213
1
java.lang.java.lang.NoClassDefFoundError tech-support Need help to get things working
#296 opened Jan 12, 2024 by nicknamexiaozui
11
Finish the global gateway logic for better macOS support enhancement New feature or request macos-gui
#295 opened Dec 23, 2023 by ctrueden next-release
@ctrueden @elevans
2
Map ImgLib2 ColorTable objects to/from Python cmap.Colormap
#294 opened Dec 1, 2023 by ctrueden unscheduled
Consider using magicgui for notebook interactivity enhancement New feature or request
#293 opened Dec 1, 2023 by ctrueden unscheduled
Failed to create a JVM with the requested environment.
#291 opened Nov 3, 2023 by JeBiUKD
6
imagej doctor should recognize non-zero return values bug Something isn't working
#289 opened Oct 18, 2023 by hinerm
Setting up PyImageJ without internet access
#287 opened Sep 18, 2023 by KSchmidtACR
3
ImgLabeling conversions use suboptimal tmp directory
#286 opened Sep 12, 2023 by ctrueden unscheduled
Ij.io().open() raises java.lang.NullPointerException
#285 opened Sep 11, 2023 by biosciflo
4
Remove warning in upcoming cellpose/stardist segmentation jupyter notebook
#284 opened Sep 6, 2023 by elevans
pyimagej image.init() FileNotFoundError: [Errno 2] No such file or directory: ~.m2/repository/io/scif/scifio-labeling/0.3.1/scifio-labeling-0.3.1.jar bug Something isn't working tech-support Need help to get things working
#278 opened Jul 8, 2023 by benwilks
6
Using PyimageJ to collect width by height for individual objects. tech-support Need help to get things working
#274 opened Jun 29, 2023 by BrandonUL
3
imagej in java code is not regconized tech-support Need help to get things working
#273 opened Jun 28, 2023 by chautuankien
2
Multiple copies of verbose output might be shown bug Something isn't working
#269 opened Jun 22, 2023 by ctrueden
imagej.doctor should notice subprocess crashes bug Something isn't working
#268 opened Jun 22, 2023 by ctrueden
ProTip! Mix and match filters to narrow down what you’re looking for.