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Fixing IDs and syntax of DPs #13998

Merged
merged 1 commit into from
Aug 8, 2017
Merged

Fixing IDs and syntax of DPs #13998

merged 1 commit into from
Aug 8, 2017

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cmungall
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@cmungall cmungall requested a review from dosumis July 29, 2017 19:36
@cmungall
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@balhoff and @dosumis - so far I've only gotten one of these to actually produce results:

$ wc validated_patterns/*tsv
       8      69    1196 validated_patterns/activator_activity.tsv
       1       4      52 validated_patterns/envenomation.tsv
       1       4      82 validated_patterns/inhibitor_activity.tsv
       1       6     136 validated_patterns/membrane_region.tsv
       1       4      82 validated_patterns/regulator_activity.tsv

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dosumis commented Aug 7, 2017

@balhoff and @dosumis - so far I've only gotten one of these to actually produce results:

Probably at least partly due to outstanding feature requests for dosdp-tools:

  • RegEx support
  • Making vars field optional in printf fields (used for fixed values like namespace).
  • Support for new TSV spec.

Looking in to details now.

@cmungall cmungall merged commit f23ce81 into master Aug 8, 2017
@cmungall cmungall deleted the dp-yaml-syntax-fixes branch August 8, 2017 02:54
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2 participants