Skip to content

Add check for definition xrefs that are not also term xrefs #1452

Add check for definition xrefs that are not also term xrefs

Add check for definition xrefs that are not also term xrefs #1452

# This is a basic workflow to help you get started with Actions
name: CI
# Controls when the action will run.
on:
# Triggers the workflow on push or pull request events but only for the master branch
push:
branches: [ master ]
pull_request:
branches: [ master ]
# Allows you to run this workflow manually from the Actions tab
workflow_dispatch:
# A workflow run is made up of one or more jobs that can run sequentially or in parallel
jobs:
validate_yaml_and_metadata:
runs-on: ubuntu-latest
container: geneontology/dev-base:latest
steps:
- uses: actions/checkout@v2
- name: Install packages
run: apt-get update -qq && apt-get install -y python3 python3-pip mmv -qq
- name: Install python stuff
run: pip3 install pyyaml typing linkml==1.7.4
## Validate YAML schema for https://github.com/geneontology/go-ontology/issues/27399
- name: Validate YAML schema
run: |
linkml-validate -s src/ontology/subsets/subsets.schema.yaml src/ontology/subsets/go_subsets_metadata.yaml