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Review annotations to GO:0044237 cellular metabolic process, GO:0046950 cellular ketone body metabolic process, GO:0046379 extracellular polysaccharide metabolic process, GO:0031323 regulation of cellular metabolic process, GO:0006521 regulation of cellular amino acid metabolic process, GO:0031324 negative regulation of cellular metabolic process, GO:0031325 positive regulation of cellular metabolic process #5470

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edwong57 opened this issue Oct 7, 2024 · 4 comments
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annotation review direct_ann_to_list_of_terms Direct annotations to list of GO terms

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@edwong57
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edwong57 commented Oct 7, 2024

Dear all,

The proposal has been made to obsolete:

  • GO:0044237 cellular metabolic process
  • GO:0046950 cellular ketone body metabolic process
  • GO:0046379 extracellular polysaccharide metabolic process
  • GO:0031323 regulation of cellular metabolic process
  • GO:0006521 regulation of cellular amino acid metabolic process
  • GO:0031324 negative regulation of cellular metabolic process
  • GO:0031325 positive regulation of cellular metabolic process

see geneontology/go-ontology#29021

Experimental annotations that need to be reviewed are here:
https://docs.google.com/spreadsheets/d/1jidBh1orXXYwk8TbcTei-1m96yP2YMOd5avUFnPAWLM/edit?usp=sharing

Impacted groups:
1 BHF-UCL
1 SGD
1 CGD
1 PseudoCAP
1 TAIR
52 MGI
1 RGD
4 UniProt


Mappings to review:
7 InterPro

Thanks.

@jlewsmith
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CGD done

@slaulederkind
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RGD finished.

@sarach06
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Hi,
Thanks you very much. I have removed GO:0044237 from InterPro entries, which will be visible in the next release (InterPro 103.0). For the rest of the GO terms listed, we don't have any mappings.
Best,
Sara

@tberardini
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TAIR done

@tberardini tberardini removed their assignment Oct 16, 2024
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Labels
annotation review direct_ann_to_list_of_terms Direct annotations to list of GO terms
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