Skip to content

Pull requests: galaxyproject/tools-iuc

New pull request New
349 Open 5,615 Closed
349 Open 5,615 Closed
Author
Filter by author
Loading
Label
Filter by label
Loading
Use alt + click/return to exclude labels
or ⇧ + click/return for logical OR
Projects
Filter by project
Loading
Milestones
Filter by milestone
Loading
Reviews
Filter by reviews
No reviews Review required Approved review Changes requested
Assignee
Filter by who’s assigned
Assigned to nobody Loading
Sort
Sort by
Newest Oldest Most commented Least commented Recently updated Least recently updated Best match
Most reactions
👍 👎 😄 🎉 😕 ❤️ 🚀 👀

Pull requests list

Updating tools/sequali from version 1.0.1 to 1.0.2
#7276 opened Sep 15, 2025 by gxydevbot Loading…
Updating tools/ppanggolin from version 2.2.4 to 2.2.5
#7275 opened Sep 15, 2025 by gxydevbot Loading…
Updating tools/gtdbtk from version 2.4.1 to 2.5.2
#7274 opened Sep 15, 2025 by gxydevbot Loading…
Updating tools/fermikit from version r193 to r204
#7273 opened Sep 15, 2025 by gxydevbot Loading…
Updating tools/ensembl_vep from version 115 to 115.1
#7272 opened Sep 15, 2025 by gxydevbot Loading…
Updating tools/cutesv from version 2.1.2 to 2.1.3
#7271 opened Sep 15, 2025 by gxydevbot Loading…
Add required_files to addName
#7264 opened Sep 8, 2025 by natefoo Loading…
5 tasks
4
Add MaAsLin3
#7263 opened Sep 8, 2025 by SantaMcCloud Loading…
3 of 5 tasks
Updating tools/coreprofiler from version 1.1.3 to 1.1.4
#7258 opened Sep 8, 2025 by gxydevbot Loading…
1
Update kraken2 and add support for custom databases
#7257 opened Sep 4, 2025 by pvanheus Loading…
3 of 5 tasks
15
Updating tools/trimmomatic from version 0.39 to 0.40
#7253 opened Sep 1, 2025 by gxydevbot Loading…
Updating tools/freyja from version 2.0.0 to 2.0.1
#7251 opened Sep 1, 2025 by gxydevbot Loading…
Updating tools/biom_format from version 2.1.15 to 2.1.17
#7250 opened Sep 1, 2025 by gxydevbot Loading…
autocycler suit
#7247 opened Aug 27, 2025 by mthang Loading…
3 of 5 tasks
Bump version to latest ena webin cli
#7243 opened Aug 26, 2025 by bedroesb Loading…
3 of 5 tasks
bakta, fix for local DB usage
#7241 opened Aug 25, 2025 by lsterck Loading…
3 of 5 tasks
6
Updating tools/nanocomp from version 1.25.3 to 1.25.4
#7238 opened Aug 25, 2025 by gxydevbot Loading…
3
Updating tools/ncbi_datasets from version 18.5.1 to 18.7.0
#7227 opened Aug 18, 2025 by gxydevbot Loading…
3
Updating tools/anndata2ri from version 1.3.2 to 2.0
#7225 opened Aug 18, 2025 by gxydevbot Loading…
New tool addition: metaMDBG suite
#7224 opened Aug 15, 2025 by tcollins2011 Loading…
3 of 5 tasks
39
BUSCO wrapper update to correct issue of empty table
#7220 opened Aug 14, 2025 by scorreard Loading…
1 of 5 tasks
13
Yahs : allow qname_sorted bam inputs
#7216 opened Aug 12, 2025 by Delphine-L Loading…
3 of 5 tasks
11
Updating tools/ena_webin_cli from version 8.1.1 to 9.0.1
#7212 opened Aug 11, 2025 by gxydevbot Loading…
1
Busco (5.8.0) extra test to indicate bug
#7209 opened Aug 8, 2025 by lsterck Loading…
3 of 5 tasks
23
[WIP] Add initial version of Samestr2 convert tool
#7196 opened Aug 4, 2025 by xens25 • Draft
5 tasks
ProTip! Type g p on any issue or pull request to go back to the pull request listing page.