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83 Open 130 Closed
83 Open 130 Closed
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Issues list

The missing genotype (./.) can be interpreted as a (0/0) genotype
#224 opened Nov 13, 2024 by KrithikaSubramanian
simreads fastq format
#223 opened Oct 25, 2024 by sagarc88
get tumor.only.vcf
#222 opened Oct 1, 2024 by DayTimeMouse
How ca I merged same samples called by different tools without duplicating IDs?
#221 opened Sep 17, 2024 by itsmestewart
1
SURVIVOR always skipping 1 vcf file
#220 opened Sep 4, 2024 by Anees-caas
Index the SURVIVOR VCF file
#218 opened Aug 29, 2024 by ywzhang071394
mangled header
#217 opened Aug 19, 2024 by tzvi909
1
SURVIVOR merge is resulting in a lot of missing data, can I treat them as 0/0?
#216 opened Aug 12, 2024 by qizhengyang2017
2
Bug found: SV LEN value cutted
#213 opened Mar 26, 2024 by leone93
How to merge these columns following it from SURVIVOR merge result, and gain the Paragraph software input file
#212 opened Mar 15, 2024 by HuTaoJiaZiAckerman
about the output file, which file does it come from?
#211 opened Mar 8, 2024 by Davidseye
Clarification on derivation of SV length and type
#210 opened Mar 7, 2024 by olivia-gc
I call it "Nested merge"
#209 opened Mar 6, 2024 by HuTaoJiaZiAckerman
simreads endless runtime
#208 opened Mar 6, 2024 by bjhunt-git
Incorrect SVLEN for translocations in VCF file
#207 opened Feb 15, 2024 by ethering
SURVIVOR simSV - number of SVs doesn't correspond to parmas file
#206 opened Jan 22, 2024 by ethering
insertions.fa contains no insertion sequences
#205 opened Jan 19, 2024 by ethering
3
Merging UKB SV Files
#204 opened Dec 20, 2023 by GHawkes93
1
Inaccurate Chain Orientation in Survivor SV Results Merging
#203 opened Dec 11, 2023 by zhaowsong
Incorrect zero-based VCF file
#202 opened Dec 5, 2023 by ethering
3
no read support or mapping quality info in VCF
#201 opened Nov 14, 2023 by heidihyang
1
Not able to merge insertions
#199 opened Aug 30, 2023 by beantkapoor786
5
merge error
#198 opened Aug 28, 2023 by Qijie0615
Compatability with Duet
#197 opened Aug 10, 2023 by mzwaig
INS POS!=END
#196 opened Jul 25, 2023 by jasonbhn
ProTip! What’s not been updated in a month: updated:<2024-11-15.