BT 0.1.8

This release was necceessary to make BT compatible with new CRAN policies, in particular a switch to HTML5 for documentation pages

Bugfixes

• fixes HTML validation problems connected to the recent switch to HTML5 for documentation pages in R 4.2 #240.
• fixes detritus problems under Windows dev, which, after a long search, turned up to be caused by some stray parallel notes #244

Minor changes

• Help improvements and clarifications

BT 0.1.7

This is minor update that was neccesary because of a change to behavior of class(matrix) in CRAN devel, see #191. See NEWS for changes.

BT 0.1.6

New features

• calibrationTest + helper functions to test for #172

Major changes

• None

Minor changes

• Help improvements and clarifications

Bugfixes

• Bugfix AR1 likelihood #169
• Bugfix restart MCMC #158

BT 0.1.5.1

various smaller updates

BT 0.1.4.1

Merge branch 'development'

# Conflicts:
#	BayesianTools/.Rbuildignore

BT 0.1.4

Compatibility

• added NIMBLE support to getSample and plotting functions
• added coda support to plotTimeSeriesResults and plotMarginals

Changes

• IMPORTANT: added a warning when calling runMCMC with the "twalk" sampler. At the moment, using this sampler is discouraged
• marginalPlot can now plot prior and/or posterior, either as histogram or as violin plots
• added bridge sampling to marginalLikelihood
• added shortcuts for AM, DR and DRAM samplers

Bugfixes:

• when calling getSample on mcmcSamplerList, the chains are now merged instead of concatenated
• formulas in the vignette are now rendered correctly
• fixed a bug in VSEM help

Minor Changes:

• changed the ordering of the summary metrics of summary.mcmcSampler, and summary.mcmcSamplerList
• renamed marginalLikelihood output to "ln.ML"
• added tests for plotTimeSeriesResults, marginalPlot and marginalLikelihood
• added an example with restart to DEzs

BT 0.1.3

Compatibility

• created compatibility to new Rcpp standard

Changes

• getSample extended to coda objects, so that all plot functions can also be used on coda objects
• plotTimeSeriesResults now includes the option to create residual plots from posterior predictive simulations, calling the DHARMa package
• added new utitility functions sampleEquallySpaced and correctThin

Bugfixes

• IMPORTANT: fixed a bug in createPriorDensity - results with createPriorDensity prior to this bugfix may be unrealiable
• getSample now corrects wrong inputs for thin and numSamples instead of throwing an error
• smaller bugfixes in plot functions

BT 0.1.2

Bugfixes

• various smaller improvement / bugfixes in getSample, plot functions / Help (0.1.2)
• warnings / bugfixes associated to burnin arguments (0.1.1.2)
• bugfix in marginal plots (0.1.1.1)

BT 0.1.1.2

• warnings / bugfixes associated to burnin arguments (0.1.1.2)

BT 0.1.1.1

• bugfix in marginal plots (0.1.1.1)