added param printCorrelation to summary.mcmcSampler

florianhartig · Oct 27, 2023 · 6fa3038 · 6fa3038
1 parent 1758692
commit 6fa3038
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diff --git a/BayesianTools/R/classMcmcSampler.R b/BayesianTools/R/classMcmcSampler.R
@@ -117,6 +117,7 @@ getSample.mcmcSampler <- function(sampler, parametersOnly = T, coda = F, start =
 #' @description
 #' Creates a summary table of a MCMC output
 #' @param object object of class mcmcSampler or mcmcSamplerList
+#' @param printCorrelation if set to TRUE, prints correlation among samples
 #' @param ... not implemented  
 #' @method summary mcmcSampler
 #' @author Stefan Paul

diff --git a/BayesianTools/R/classMcmcSamplerList.R b/BayesianTools/R/classMcmcSamplerList.R
@@ -17,7 +17,6 @@ createMcmcSamplerList <- function(mcmcList){
 #' @method summary mcmcSamplerList
 #' @describeIn summary.mcmcSampler 
 #' @export
-
 summary.mcmcSamplerList <- function(object, ...){
   #codaChain = getSample(sampler, parametersOnly = parametersOnly, coda = T, ...)
   #summary(codaChain)

diff --git a/BayesianTools/man/summary.mcmcSampler.Rd b/BayesianTools/man/summary.mcmcSampler.Rd
diff --git a/BayesianTools/vignettes/testVignette.Rmd b/BayesianTools/vignettes/testVignette.Rmd
@@ -95,7 +95,4 @@ correlationPlot(res)
 # Fitting a ecosystem model with the BT package 
 
 
-?VSEM   
-How do I know lower and upper?
-
Original file line number	Diff line number	Diff line change
Expand Up		@@ -95,7 +95,4 @@ correlationPlot(res)
		# Fitting a ecosystem model with the BT package


		?VSEM
		How do I know lower and upper?