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Hot-fix for broken Stokes tests
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pbrubeck committed Feb 11, 2025
1 parent 9650136 commit 6503519
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Showing 2 changed files with 31 additions and 34 deletions.
63 changes: 30 additions & 33 deletions tests/firedrake/macro/test_macro_solve.py
Original file line number Diff line number Diff line change
Expand Up @@ -6,10 +6,11 @@
@pytest.fixture(params=("square", "cube"))
def mh(request):
if request.param == "square":
base_msh = UnitSquareMesh(3, 3)
return [UnitSquareMesh(2**r, 2**r) for r in range(1, 4)]
elif request.param == "cube":
base_msh = UnitCubeMesh(2, 2, 2)
return MeshHierarchy(base_msh, 2)
return [UnitCubeMesh(2**r, 2**r, 2**r) for r in range(1, 4)]
else:
raise ValueError("Unexpected mesh type")


@pytest.fixture(params=["iso", "alfeld", "th"])
Expand All @@ -33,35 +34,27 @@ def mixed_element(mh, variant):
return Vel, Pel


def mesh_sizes(mh):
mesh_size = []
for msh in mh:
DG0 = FunctionSpace(msh, "DG", 0)
h = Function(DG0).interpolate(CellDiameter(msh))
with h.dat.vec as hvec:
_, maxh = hvec.max()
mesh_size.append(maxh)
return mesh_size


def conv_rates(x, h):
def conv_rates(x, h=None):
x = np.asarray(x)
h = np.asarray(h)
return np.log2(x[:-1] / x[1:]) / np.log2(h[:-1] / h[1:])
rates = np.log2(x[:-1] / x[1:])
if h is not None:
h = np.asarray(h)
rates /= np.log2(h[:-1] / h[1:])
return rates


@pytest.fixture
def convergence_test(variant):
if variant == "iso":
def check(uerr, perr, h):
return (conv_rates(uerr, h)[-1] >= 1.9
def check(uerr, perr):
return (conv_rates(uerr)[-1] >= 1.9
and np.allclose(perr, 0, atol=1.e-8))
elif variant == "alfeld":
def check(uerr, perr, h):
def check(uerr, perr):
return (np.allclose(uerr, 0, atol=5.e-9)
and np.allclose(perr, 0, atol=5.e-7))
elif variant == "th":
def check(uerr, perr, h):
def check(uerr, perr):
return (np.allclose(uerr, 0, atol=1.e-10)
and np.allclose(perr, 0, atol=1.e-8))
return check
Expand Down Expand Up @@ -112,7 +105,7 @@ def test_riesz(mh, variant, mixed_element, convergence_test):
u_err.append(errornorm(as_vector(zexact[:dim]), uh))
p_err.append(errornorm(zexact[-1], ph))

assert convergence_test(u_err, p_err, mesh_sizes(mh))
assert convergence_test(u_err, p_err)


def stokes_mms(Z, zexact):
Expand All @@ -121,7 +114,7 @@ def stokes_mms(Z, zexact):
u, p = split(trial)
v, q = split(test)

a = (inner(grad(u), grad(v)) * dx
a = (inner(grad(u) + grad(u).T, grad(v)) * dx
- inner(p, div(v)) * dx
- inner(div(u), q) * dx)

Expand All @@ -131,9 +124,8 @@ def stokes_mms(Z, zexact):

def errornormL2_0(pexact, ph):
msh = ph.function_space().mesh()
vol = assemble(1*dx(domain=msh))
err = pexact - ph
return sqrt(abs(assemble(inner(err, err)*dx) - (1/vol)*abs(assemble(err*dx))**2))
p0 = assemble((pexact - ph) * dx) / assemble(1*dx(domain=msh))
return errornorm(pexact - Constant(p0), ph)


def test_stokes(mh, variant, mixed_element, convergence_test):
Expand All @@ -156,17 +148,22 @@ def test_stokes(mh, variant, mixed_element, convergence_test):
a, L = stokes_mms(Z, as_vector(zexact))
bcs = DirichletBC(Z[0], as_vector(zexact[:dim]), "on_boundary")

pconst = VectorSpaceBasis(constant=True, comm=Z.comm)
nullspace = MixedVectorSpaceBasis(Z, [Z.sub(0), pconst])
zh = Function(Z)
nullspace = MixedVectorSpaceBasis(
Z,
[Z.sub(0), VectorSpaceBasis(constant=True, comm=COMM_WORLD)]
)
solve(a == L, zh, bcs=bcs, nullspace=nullspace, solver_parameters={"ksp_type": "gmres"})
solve(a == L, zh, bcs=bcs,
nullspace=nullspace,
solver_parameters={
"mat_type": "nest",
"ksp_type": "gmres",
"ksp_pc_side": "right",
"pc_type": "lu"})

uh, ph = zh.subfunctions
u_err.append(errornorm(as_vector(zexact[:dim]), uh))
p_err.append(errornormL2_0(zexact[-1], ph))

assert convergence_test(u_err, p_err, mesh_sizes(mh))
assert convergence_test(u_err, p_err)


def test_div_free(mh, variant, mixed_element, div_test):
Expand All @@ -179,7 +176,7 @@ def test_div_free(mh, variant, mixed_element, div_test):
V = VectorFunctionSpace(msh, el1)
Q = FunctionSpace(msh, el2)
Z = V * Q
a, L = stokes_mms(Z, Constant([0] * (dim+1)))
a, L = stokes_mms(Z, zero((dim+1, )))

f = as_vector([1] + [0] * (dim-1))
for k in range(1, dim):
Expand Down
2 changes: 1 addition & 1 deletion tests/firedrake/regression/test_stokes_hdiv_parallel.py
Original file line number Diff line number Diff line change
Expand Up @@ -132,6 +132,6 @@ def test_stokes_hdiv_parallel(mat_type, element_pair):
err_p = numpy.asarray(err_p)
err_div = numpy.asarray(err_div)

assert numpy.allclose(err_div, 0, atol=1e-7, rtol=1e-5)
assert numpy.allclose(err_div, 0, atol=2e-7, rtol=1e-5)
assert (numpy.log2(err_u[:-1] / err_u[1:]) > 2.8).all()
assert (numpy.log2(err_p[:-1] / err_p[1:]) > 1.8).all()

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