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@marbl @knightlab-analyses

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  1. marbl/MetagenomeScope Public

    Visualization tool for (meta)genome assembly graphs

    JavaScript 23 8

  2. biocore/qurro Public

    Visualize differentially ranked features (taxa, metabolites, ...) and their log-ratios across samples

    JavaScript 33 10

  3. biocore/empress Public

    A fast and scalable phylogenetic tree viewer for microbiome data analysis

    JavaScript 53 31

  4. strainFlye Public

    Pipeline for analyzing (rare) mutations in metagenome-assembled genomes

    Python 11 2

  5. pyfastg Public

    A minimal Python library for parsing SPAdes FASTG files

    Python 7

  6. wotplot Public

    Small Python library for creating and visualizing dot plot matrices

    Python 4