sketch of how default kernel will change #1329
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| name: Tests | |
| on: | |
| push: | |
| branches: | |
| - main | |
| pull_request: | |
| branches: | |
| - main | |
| jobs: | |
| testing_data_models: | |
| runs-on: ubuntu-latest | |
| strategy: | |
| matrix: | |
| python-version: ['3.9', '3.10', '3.11' ] | |
| steps: | |
| - name: Check out repo | |
| uses: actions/checkout@v4 | |
| - name: Set up Python | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Set up uv | |
| uses: astral-sh/setup-uv@v2 | |
| with: | |
| enable-cache: true | |
| - name: Install Dependencies | |
| run: uv pip install "." pytest --system | |
| - name: Run data model tests | |
| run: pytest tests/bofire/data_models | |
| testing: | |
| runs-on: ubuntu-latest | |
| strategy: | |
| matrix: | |
| python-version: [ '3.9', '3.11' ] | |
| steps: | |
| - name: Check out repo | |
| uses: actions/checkout@v4 | |
| - name: Setup Conda | |
| uses: conda-incubator/setup-miniconda@v3 | |
| with: | |
| miniconda-version: "latest" | |
| activate-environment: test | |
| python-version: ${{ matrix.python-version }} | |
| - name: Install Dependencies | |
| shell: bash -l {0} | |
| run: | | |
| conda install -c conda-forge cyipopt | |
| pip install ".[optimization,tests,cheminfo,xgb,entmoot]" | |
| - name: Run tests | |
| shell: bash -l {0} | |
| run: pytest -ra --cov=bofire --cov-report term-missing tests | |
| - name: Run pip freeze | |
| shell: bash -l {0} | |
| run: pip freeze | |
| testing_against_latest_botorch: | |
| runs-on: ubuntu-latest | |
| strategy: | |
| matrix: | |
| python-version: [ '3.10' ] | |
| steps: | |
| - name: Check out repo | |
| uses: actions/checkout@v4 | |
| - uses: conda-incubator/setup-miniconda@v3 | |
| with: | |
| miniconda-version: "latest" | |
| activate-environment: test | |
| python-version: ${{ matrix.python-version }} | |
| - name: Install Dependencies | |
| shell: bash -l {0} | |
| run: | | |
| conda install -c conda-forge cyipopt | |
| pip install --upgrade git+https://github.com/cornellius-gp/linear_operator.git | |
| pip install --upgrade git+https://github.com/cornellius-gp/gpytorch.git | |
| export ALLOW_LATEST_GPYTORCH_LINOP=true | |
| pip install --upgrade git+https://github.com/pytorch/botorch.git | |
| pip install ".[optimization,tests,cheminfo,xgb,entmoot]" | |
| - name: Run tests | |
| shell: bash -l {0} | |
| run: pytest -ra --cov=bofire --cov-report term-missing tests | |
| - name: Run pip freeze | |
| shell: bash -l {0} | |
| run: pip freeze | |
| testing_tutorials: | |
| runs-on: ubuntu-latest | |
| strategy: | |
| matrix: | |
| python-version: [ '3.10' ] | |
| steps: | |
| - name: Check out repo | |
| uses: actions/checkout@v4 | |
| - name: Setup Conda | |
| uses: conda-incubator/setup-miniconda@v3 | |
| with: | |
| miniconda-version: "latest" | |
| activate-environment: test | |
| python-version: ${{ matrix.python-version }} | |
| - name: Install Dependencies | |
| shell: bash -l {0} | |
| run: | | |
| conda install -c conda-forge cyipopt | |
| pip install ".[optimization,tests,cheminfo,xgb,entmoot,tutorials]" | |
| - name: Run Notebooks | |
| shell: bash -l {0} | |
| run: python scripts/run_tutorials.py |