Support NASA HIWAT and European COSMO weather prediction models

.gitignore

@@ -55,3 +55,10 @@ docs/_build/
 
 # PyBuilder
 target/
+
+#other
+*~
+*.DS_Store
+
+# pycharm
+.idea/

.pylintrc

@@ -0,0 +1,4 @@
+[MESSAGES CONTROL]
+disable=invalid-name,bad-continuation,too-many-lines,superfluous-parens,too-many-arguments,too-many-branches,too-many-statements,too-many-locals,too-few-public-methods,too-many-instance-attributes
+[TYPECHECK]
+ignored-modules=numpy,netCDF4,scipy,scipy.spatial

.travis.yml

@@ -0,0 +1,116 @@
+#*******************************************************************************
+#.travis.yml
+#*******************************************************************************
+
+#Purpose:
+#Travis CI is a hosted continuous integration service, that is, it allows
+#running code directly from a repository and checking that the code acts as
+#expected. The purpose of the .travis.yml file is to give instructions to Travis
+#CI on how to do the work.
+#Authors:
+#Alan D. Snow, 2016, based on initial .yml file by Cedric H. David
+
+#*******************************************************************************
+#System specifications for Travis CI
+#*******************************************************************************
+language: c
+os:
+ - linux
+ - osx
+env:
+ - TRAVIS_PYTHON_VERSION="2.7"
+ - TRAVIS_PYTHON_VERSION="3.5"
+ - TRAVIS_PYTHON_VERSION="3.6"
+matrix:
+ fast_finish: true
+ allow_failures:
+ - os: osx
+notifications:
+ email: false
+
+#*******************************************************************************
+#Before installing RAPIDpy
+#*******************************************************************************
+before_install:
+- if [[ "$TRAVIS_OS_NAME" == "linux" ]]; then
+ sudo apt-get update -qq;
+ sudo apt-get install -y g++ gfortran;
+ fi
+- if [[ "$TRAVIS_OS_NAME" == "osx" ]]; then
+ brew update;
+ brew install gcc;
+ fi
+
+#-------------------------------------------------------------------------------
+#Add miniconda - from https://gist.github.com/dan-blanchard/7045057
+#-----------------------------------------------------------------------------
+
+- if [[ "$TRAVIS_OS_NAME" == "linux" ]]; then
+ wget http://repo.continuum.io/miniconda/Miniconda${TRAVIS_PYTHON_VERSION:0:1}-latest-Linux-x86_64.sh -O miniconda.sh;
+ fi
+- if [[ "$TRAVIS_OS_NAME" == "osx" ]]; then
+ curl -o miniconda.sh https://repo.continuum.io/miniconda/Miniconda${TRAVIS_PYTHON_VERSION:0:1}-latest-MacOSX-x86_64.sh;
+ fi
+- chmod +x miniconda.sh
+- ./miniconda.sh -b -p $HOME/miniconda
+- export PATH=$HOME/miniconda/bin:$PATH
+- conda update --yes conda python
+#create environment in conda
+- conda create --yes --name rapid python=$TRAVIS_PYTHON_VERSION
+- source activate rapid
+
+#-----------------------------------------------------------------------------
+# Install required python packages
+#-----------------------------------------------------------------------------
+- conda config --add channels conda-forge
+- conda install --yes cmake gdal future netcdf4 numpy pandas pangaea pyproj pytz requests rtree scipy shapely
+- source deactivate rapid
+
+#-------------------------------------------------------------------------------
+#Creating directory for installation of libraries used by RAPID & RAPIDpy
+#-------------------------------------------------------------------------------
+- export INSTALLZ_DIR=$TRAVIS_BUILD_DIR/installz
+- mkdir $INSTALLZ_DIR
+
+#-------------------------------------------------------------------------------
+#Installing RAPID
+#-------------------------------------------------------------------------------
+- cd $TRAVIS_BUILD_DIR/..
+- git clone https://github.com/c-h-david/rapid.git --branch 20161221
+- cd rapid
+# Installing RAPID Prereqs
+- bash rapid_install_prereqs.sh -i=$INSTALLZ_DIR
+- source rapid_specify_varpath.sh $INSTALLZ_DIR
+# Building RAPID
+- cd src
+- make rapid
+
+#-------------------------------------------------------------------------------
+#Installing TauDEM
+#-------------------------------------------------------------------------------
+- if [[ "$TRAVIS_OS_NAME" == "linux" ]]; then
+ cd $TRAVIS_BUILD_DIR/.. ;
+ git clone https://github.com/dtarb/TauDEM.git ;
+ cd TauDEM/src ;
+ rm makefile ;
+ source activate rapid ;
+ cmake . ;
+ make ;
+ fi
+
+#*******************************************************************************
+#Installing RAPIDpy
+#*******************************************************************************
+install:
+- cd $TRAVIS_BUILD_DIR
+- pip install -e .[tests]
+#*******************************************************************************
+#Testing RAPIDpy
+#*******************************************************************************
+script:
+- py.test --cov-report term-missing --cov=RAPIDpy
+- flake8 RAPIDpy
+- pylint RAPIDpy
+##ADD Coveralls stats for code coverage
+after_success:
+- coveralls

LICENSE

@@ -0,0 +1,27 @@
+Copyright (c) 2016, ERDC Computational Mechanics
+All rights reserved.
+
+Redistribution and use in source and binary forms, with or without
+modification, are permitted provided that the following conditions are met:
+
+* Redistributions of source code must retain the above copyright notice, this
+ list of conditions and the following disclaimer.
+
+* Redistributions in binary form must reproduce the above copyright notice,
+ this list of conditions and the following disclaimer in the documentation
+ and/or other materials provided with the distribution.
+
+* Neither the name of RAPIDpy nor the names of its
+ contributors may be used to endorse or promote products derived from
+ this software without specific prior written permission.
+
+THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
+AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
+IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE
+DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE LIABLE
+FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL
+DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR
+SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER
+CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY,
+OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE
+OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.

MANIFEST.in

@@ -0,0 +1,2 @@
+include LICENSE
+include README.md

RAPIDpy/__init__.py

@@ -0,0 +1,9 @@
+# -*- coding: utf-8 -*-
+"""
+ RAPIDpy
+
+ Created by Alan D Snow, 2015.
+ License: BSD 3-Clause
+"""
+from .rapid import RAPID # noqa
+from .dataset import RAPIDDataset # noqa