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@epiverse-trace

Epiverse-TRACE

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  1. sivirep sivirep Public

    Data Wrangling and Automated Reports from 'SIVIGILA' source

    R 40 3

  2. epiparameter epiparameter Public

    R package with library of epidemiological parameters for infectious diseases and functions and classes for working with parameters

    R 33 11

  3. serofoi serofoi Public

    Estimates the Force-of-Infection of a given pathogen from population based sero-prevalence studies

    R 17 4

  4. vaccineff vaccineff Public

    R package with tools for estimating vaccine effectiveness and vaccine related metrics

    R 15 2

  5. cfr cfr Public

    R package to estimate disease severity and under-reporting in real-time, accounting for reporting delays in epidemic time-series

    R 13 3

  6. epiCo epiCo Public

    R package for statistical and spatiotemporal modeling of epidemiological data for vector-borne diseases in Colombia

    R 12 1

Repositories

Showing 10 of 59 repositories
  • tutorials-early Public
    epiverse-trace/tutorials-early’s past year of commit activity
    R 2 0 33 2 Updated Nov 8, 2024
  • vaccineff Public

    R package with tools for estimating vaccine effectiveness and vaccine related metrics

    epiverse-trace/vaccineff’s past year of commit activity
    R 15 2 9 (1 issue needs help) 2 Updated Nov 8, 2024
  • climateR0 Public
    epiverse-trace/climateR0’s past year of commit activity
    R 0 0 0 5 Updated Nov 8, 2024
  • .github Public
    epiverse-trace/.github’s past year of commit activity
    1 1 3 0 Updated Nov 8, 2024
  • tutorials Public
    epiverse-trace/tutorials’s past year of commit activity
    R 3 2 49 (2 issues need help) 3 Updated Nov 7, 2024
  • epiverse-trace.github.io Public

    Technical blog of the Epiverse-TRACE project, where we share opinions and investigations in R package development, or scientific software development more generally

    epiverse-trace/epiverse-trace.github.io’s past year of commit activity
    R 3 3 11 (2 issues need help) 2 Updated Nov 7, 2024
  • cleanepi Public

    R package to clean and standardize epidemiological data

    epiverse-trace/cleanepi’s past year of commit activity
    R 8 3 23 3 Updated Nov 7, 2024
  • tutorials-late Public
    epiverse-trace/tutorials-late’s past year of commit activity
    R 2 1 32 4 Updated Nov 7, 2024
  • epidemics Public

    A library of published compartmental epidemic models, and classes to represent demographic structure, non-pharmaceutical interventions, and vaccination regimes, to compose epidemic scenarios.

    epiverse-trace/epidemics’s past year of commit activity
    R 8 2 15 (1 issue needs help) 1 Updated Nov 7, 2024
  • serofoi Public

    Estimates the Force-of-Infection of a given pathogen from population based sero-prevalence studies

    epiverse-trace/serofoi’s past year of commit activity
    R 17 4 23 2 Updated Nov 6, 2024
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