iox-#2329 Use iox::concurrent::Atomic

[elBoberido]

Notes for Reviewer

This PR replaces std::atomic with iox::concurrent::Atomic and adds a shell script to check for invalid use of std::atomic

Pre-Review Checklist for the PR Author

1. Code follows the coding style of CONTRIBUTING.md
2. Tests follow the best practice for testing
3. Changelog updated in the unreleased section including API breaking changes
4. Branch follows the naming format (iox-123-this-is-a-branch)
5. Commits messages are according to this guideline
   • Commit messages have the issue ID (iox-#123 commit text)
   • Commit author matches Eclipse Contributor Agreement (and ECA is signed)
6. Update the PR title
   • Follow the same conventions as for commit messages
   • Link to the relevant issue
7. Relevant issues are linked
8. Add sensible notes for the reviewer
9. All checks have passed (except task-list-completed)
10. Assign PR to reviewer

Checklist for the PR Reviewer

• Consider a second reviewer for complex new features or larger refactorings
• Commits are properly organized and messages are according to the guideline
• Code according to our coding style and naming conventions
• Unit tests have been written for new behavior
• Public API changes are documented via doxygen
• Copyright owner are updated in the changed files
• All touched (C/C++) source code files from iceoryx_hoofs have been added to ./clang-tidy-diff-scans.txt
• PR title describes the changes

Post-review Checklist for the PR Author

1. All open points are addressed and tracked via issues

References

• Closes Add std::atomic abstraction #2329

[codecov]

Codecov Report

Attention: Patch coverage is 50.00000% with 2 lines in your changes missing coverage. Please review.

Project coverage is 78.22%. Comparing base (8a2a18f) to head (bf4e66a).
Report is 5 commits behind head on main.

Files	Patch %	Lines
iceoryx_posh/source/runtime/posh_runtime.cpp	0.00%	2 Missing ⚠️

Additional details and impacted files

@@           Coverage Diff           @@
##             main    #2332   +/-   ##
=======================================
  Coverage   78.21%   78.22%           
=======================================
  Files         433      433           
  Lines       16028    16034    +6     
  Branches     2303     2302    -1     
=======================================
+ Hits        12537    12543    +6     
  Misses       2644     2644           
  Partials      847      847           

Flag	Coverage Δ
unittests	78.05% <50.00%> (+<0.01%)	⬆️
unittests_timing	15.04% <0.00%> (+0.18%)	⬆️

Flags with carried forward coverage won't be shown. Click here to find out more.

Files	Coverage Δ
...ncurrent/buffer/include/iox/detail/mpmc_loffli.hpp	100.00% <ø> (ø)
...lude/iox/detail/mpmc_resizeable_lockfree_queue.hpp	100.00% <ø> (ø)
...concurrent/buffer/include/iox/detail/spsc_sofi.hpp	100.00% <ø> (ø)
...ryx_hoofs/concurrent/buffer/source/mpmc_loffli.cpp	87.09% <ø> (-0.41%)	⬇️
.../design/include/iox/detail/polymorphic_handler.inl	87.17% <ø> (ø)
...esign/include/iox/detail/static_lifetime_guard.inl	94.28% <ø> (+0.73%)	⬆️
iceoryx_hoofs/posix/ipc/include/iox/named_pipe.hpp	100.00% <ø> (ø)
...yx_hoofs/posix/sync/include/iox/signal_watcher.hpp	100.00% <ø> (ø)
iceoryx_hoofs/posix/sync/include/iox/thread.hpp	100.00% <ø> (ø)
.../include/iox/detail/log/building_blocks/logger.inl	58.97% <ø> (ø)
... and 17 more

... and 1 file with indirect coverage changes