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A translator from Intel SSE intrinsics to Arm/Aarch64 NEON implementation
A simple and efficient tool to parallelize Pandas operations on all available CPUs
A DSL for data-driven computational pipelines
ProSolo, variant calling from single cell DNA-seq data, or: bulk backing vocals for single cell solos.
code and manuscript of "ProSolo: Accurate Variant Calling from Single Cell DNA Sequencing Data"
Official repository for Citation Style Language (CSL) citation styles.
This is the development home of the workflow management system Snakemake. For general information, see
A pure-python implementation of the UpSet suite of visualisation methods by Lex, Gehlenborg et al.
Human Pangenome Reference Consortium - HG002 Data Freeze (v1.0)
Community-curated list of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.
Validation runs using bcbio: germline, somatic, structural variant calling and RNA-seq analyses
software tools for haplotype assembly from sequence data
LaTeX template for an Oxford University thesis
Integrative Genomics Viewer. Fast, efficient, scalable visualization tool for genomics data and annotations
A flexible variational inference LDA library.
Specifications of SAM/BAM and related high-throughput sequencing file formats
scikit-learn: machine learning in Python
mlpack: a fast, header-only C++ machine learning library