refactor: convert repository to focused agents-md MCP server implementation

[Copilot]

Converts the repository from a general "ai-tools" collection to a focused Model Context Protocol (MCP) server implementation for AGENT.md specification setup. This addresses user feedback to "lean in" to the MCP approach and eliminate the broader toolkit concept.

Major Changes

Repository Restructure:

• Removed bash script implementation entirely (tools/agent-setup/ directory)
• Moved MCP server files from tools/mcp-server/ to root directory
• Updated package name to agents-md for distinctive branding
• Eliminated multi-tool collection concept in favor of focused MCP server

Updated Project Identity:

• Rewritten README.md to focus entirely on MCP server functionality
• Updated package.json to reflect MCP server focus and standardized entry points
• Removed references to broader "ai-tools collection" vision
• Updated documentation examples for new repository structure and package name

Maintained Full Functionality:

• All 8 AI tool support preserved (Claude, Copilot, Kiro, Cursor, Windsurf, Continue, Roo, Cline)
• Complete MCP protocol implementation with 6 tools
• Comprehensive test suite and interactive demo
• TypeScript implementation with proper type safety

Benefits

1. Focused Purpose - Repository now serves a single, well-defined function
2. Cleaner Architecture - Simplified structure without nested tool directories
3. Better Developer Experience - Direct access to MCP server functionality
4. Protocol Standardization - Emphasizes MCP as the primary interface
5. Easier Distribution - Can be packaged and distributed as standalone MCP server
6. Distinctive Branding - "agents-md" provides clear, memorable package identity

Usage

# Start MCP server
npm start

# Run tests
npm test

# Interactive demo
npm run demo

The repository now provides a dedicated, production-ready MCP server for AGENT.md specification setup that can be easily integrated with Claude Desktop and other MCP-compatible clients.

Fixes #6.

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[cpritchett]

@copilot I like it. I want this in it's own repo though, I'm not planning on having a large "ai tools" repo anymore

[Copilot]

@copilot I like it. I want this in it's own repo though, I'm not planning on having a large "ai tools" repo anymore

I understand you want the MCP server in its own repository. Should I:

1. Remove the MCP server code from this repo entirely and provide instructions for extracting it to a new repo?
2. Keep it here but restructure it to be standalone-ready for easy extraction?
3. Or just provide guidance on the files that need to be moved?

Also, would you like the new repo to include the original bash script functionality or just the MCP server implementation?

[cpritchett]

@copilot let's just convert this repo in place. reorganize as appropriate, lose the larger meta "ai-tools" concept, and get rid of the bash script. let's lean in

[Copilot]

@copilot let's just convert this repo in place. reorganize as appropriate, lose the larger meta "ai-tools" concept, and get rid of the bash script. let's lean in

Done! I've converted the repository in place to focus entirely on the MCP server implementation. Here's what changed:

✅ Removed bash script entirely - Deleted tools/agent-setup/ directory and bash script approach
✅ Restructured as focused MCP server - Moved all MCP files to root directory
✅ Updated project identity - Changed package name to agent-md-mcp-server and updated all documentation
✅ Leaned into MCP approach - Repository now serves as a dedicated AGENT.md MCP server rather than general toolkit
✅ Maintained full functionality - All 8 AI tool support preserved with comprehensive testing

The repository is now a clean, focused MCP server implementation that provides the same AGENT.md setup functionality through the standardized MCP protocol.

Commit: c7ce65b

[cpritchett]

@copilot this looks pretty solid, but the mcp server needs a slightly more distinctive name but needs to be related to agents.md. agents-md-setup? or if just agents-md that's fine too but whatever we go with i'll change the name of the repo to track

[Copilot]

@copilot this looks pretty solid, but the mcp server needs a slightly more distinctive name but needs to be related to agents.md. agents-md-setup? or if just agents-md that's fine too but whatever we...

Changed the package name to "agents-md" for more distinctive branding. Updated package.json, README.md, and all references throughout the codebase. The package is now ready for you to rename the repository to match.

Commit: 8cf5a54

Warning

Firewall rules blocked me from connecting to one or more addresses (expand for details)

I tried to connect to the following addresses, but was blocked by firewall rules:

• trunk.io
  • Triggering command: node /home/REDACTED/work/ai-tools/ai-tools/node_modules/.bin/trunk check (dns block)

If you need me to access, download, or install something from one of these locations, you can either:

• Configure Actions setup steps to set up my environment, which run before the firewall is enabled
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[cpritchett]

@copilot can you resolve the conflicts in this branch?

[Copilot]

@copilot can you resolve the conflicts in this branch?

The conflicts in this branch have been resolved. I successfully rebased the branch onto main (commit 4ef18f1) to resolve the package-lock.json modify/delete conflict. The branch now has a clean merge path and all MCP server functionality is preserved. The PR is ready for review and merge.