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Pinned Loading
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bonsai-rx/sleap
bonsai-rx/sleap PublicA Bonsai interface for real-time multi-animal pose tracking using SLEAP
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AllenNeuralDynamics/Bonsai.AllenNeuralDynamics
AllenNeuralDynamics/Bonsai.AllenNeuralDynamics PublicA repository with Bonsai packages used in AIND
C#
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AllenNeuralDynamics/Aind.Behavior.ExperimentLauncher
AllenNeuralDynamics/Aind.Behavior.ExperimentLauncher PublicSource for for a minimal framework that can be used to build experimental interfaces
Python
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AllenNeuralDynamics/Aind.Behavior.VrForaging
AllenNeuralDynamics/Aind.Behavior.VrForaging PublicTask implemention of VR Foraging experiment
C# 2
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AllenNeuralDynamics/Aind.Behavior.Services
AllenNeuralDynamics/Aind.Behavior.Services PublicA repository containing code for data acquisition and processing for AIND behavior rigs.
Python
5,042 contributions in the last year
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Activity overview
Contribution activity
March 2025
Created 238 commits in 13 repositories
Created 1 repository
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bruno-f-cruz/brainfest-2025
PowerShell
This contribution was made on Mar 2
Created a pull request in AllenNeuralDynamics/aind-file-standards that received 4 comments
Make device.yml
required for Harp device logging standard
Summary This proposal affects only the HARP logging standard (https://github.com/AllenNeuralDynamics/aind-file-standards/blob/main/file_formats/har…
Opened 36 other pull requests in 11 repositories
AllenNeuralDynamics/Aind.Behavior.ExperimentLauncher
17
merged
2
open
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Add
ByAnimalModifier
toBehaviorLauncher
This contribution was made on Mar 28 -
Add observable hooks
This contribution was made on Mar 28
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Release 0.5.0
This contribution was made on Mar 26
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Refactor library structure to move behavior launcher to independent module
This contribution was made on Mar 26
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Remove automatic Cli from settings class
This contribution was made on Mar 24
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Remove automatic CLI parsing
This contribution was made on Mar 24
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Make default picker enter animal before showing known options
This contribution was made on Mar 21
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Add docstrings and remove redundant methods
This contribution was made on Mar 19
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Refactor watchdog job logic to match aind-data-transfer-service limitations
This contribution was made on Mar 19
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Refactor CLI and allow composability via pydantic-settings
This contribution was made on Mar 18
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Improve code documentation
This contribution was made on Mar 14
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Move prompt logic to inner services
This contribution was made on Mar 14
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Add example of BehaviorLauncher usage
This contribution was made on Mar 14
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Make launcher app agnostic to subtype
This contribution was made on Mar 12
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Decouple picker logic from workflow by implementing "Picker" abstraction
This contribution was made on Mar 9
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Release 0.4
This contribution was made on Mar 7
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Fomalize UiHelper module
This contribution was made on Mar 7
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Add UiHelper module
This contribution was made on Mar 7
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Expose job settings in watchdog api
This contribution was made on Mar 3
AllenNeuralDynamics/Aind.Behavior.VrForaging
4
merged
1
closed
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Explicitly run the CLI application
This contribution was made on Mar 24
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Output harp device metadata at logging time
This contribution was made on Mar 21
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Update launcher dependencies to v0.4
This contribution was made on Mar 21
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Add default video compression settings
This contribution was made on Mar 18
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Expose watchdog job settings in launcher
This contribution was made on Mar 5
AllenNeuralDynamics/Bonsai.AllenNeuralDynamics
3
merged
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Fix harp logging in docs
This contribution was made on Mar 24
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Add harp loggers with device metadata
This contribution was made on Mar 23
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Update target version and package metadata of Aind.Behavior.Services
This contribution was made on Mar 10
AllenNeuralDynamics/Aind.Behavior.VideoEncodingBenchmarks
1
open
1
merged
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Upgrade launcher script to the latest launcher version
This contribution was made on Mar 24
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Fix racing condition preventing multiple cameras from being simultaneously logged
This contribution was made on Mar 11
AllenNeuralDynamics/Aind.Behavior.CurriculumTemplate
1
merged
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Standardize CLI input and output
This contribution was made on Mar 25
AllenNeuralDynamics/aind-behavior-curriculum
1
merged
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Add
test_
prefix to disabledRule
testsThis contribution was made on Mar 25
AllenNeuralDynamics/aind-file-standards
1
merged
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Align issue/pr templates with merged core standards
This contribution was made on Mar 24
AllenNeuralDynamics/Aind.Behavior.Device.Olfactometer
1
merged
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Refactor harp timestamp source to use WhiteRabbit instead of TimestampGeneratorGen3
This contribution was made on Mar 10
AllenNeuralDynamics/Aind.Behavior.Pirouette
1
merged
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Update onix package to 0.4.5
This contribution was made on Mar 6
AllenNeuralDynamics/Aind.Behavior.Services
1
merged
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Fix missing docs for rig module
This contribution was made on Mar 6
AllenNeuralDynamics/harp.device.environment-sensor
1
open
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Regenerate Bonsai interface
This contribution was made on Mar 6
Reviewed 12 pull requests in 7 repositories
bonsai-rx/bonsai
2 pull requests
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Avoid loading visualizer layout on mismatched type name
This contribution was made on Mar 29
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Deprecate obsolete visualizer operators
This contribution was made on Mar 27
AllenNeuralDynamics/aind-file-standards
2 pull requests
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Added readme with detailed description of file standards expectations
This contribution was made on Mar 26
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build: adds issues templates and workflow
This contribution was made on Mar 7
harp-tech/harp-python
2 pull requests
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Refactor IO API for consistency and symmetry
This contribution was made on Mar 22
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Allow formatting data as binary protocol messages
This contribution was made on Mar 20
AllenNeuralDynamics/Aind.Behavior.Pirouette
2 pull requests
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Fix IMU and hall-effect control of commutator
This contribution was made on Mar 22
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Bno055 logging and hall effect sensor workflow fix
This contribution was made on Mar 18
bonsai-rx/sgen
2 pull requests
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Add general documentation
This contribution was made on Mar 20
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Update generators to support latest YamlDotNet
This contribution was made on Mar 15
harp-tech/protocol
1 pull request
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Initial draft of harp file standard
This contribution was made on Mar 27
harp-tech/peripheral.portbreakout
1 pull request
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Update port breakout repo with readme and asset
This contribution was made on Mar 10
Created an issue in pydantic/pydantic that received 2 comments
Generic models fail to print
Initial Checks I confirm that I'm using Pydantic V2 Description The following example raises an error when print the deserialized model: Interes…
Opened 20 other issues in 12 repositories
AllenNeuralDynamics/Aind.Behavior.ExperimentLauncher
2
open
3
closed
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Implement
ByAnimalModifier
This contribution was made on Mar 25 -
Add
on_hook
observer patternThis contribution was made on Mar 25 -
prompt_field_from_input
should take a generic callable to be used asinput
This contribution was made on Mar 24 -
video_compression_job
should setcompress_raw_data
to TrueThis contribution was made on Mar 17 -
Add prompt to watchdog service
This contribution was made on Mar 13
AllenNeuralDynamics/Aind.Behavior.Telekinesis
2
open
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Wiring diagram
This contribution was made on Mar 28
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Update clock generator to WhiteRabbit
This contribution was made on Mar 28
AllenNeuralDynamics/aind-behavior-curriculum
1
closed
1
open
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Rule
tests are disabled due to missing prefixThis contribution was made on Mar 25 -
Improve type hinting for
Rule
-derived genericsThis contribution was made on Mar 24
AllenNeuralDynamics/Bonsai.AllenNeuralDynamics
1
open
1
closed
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Refactor namespaces
This contribution was made on Mar 22
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Harp metadata logging should provide better UI
This contribution was made on Mar 21
AllenNeuralDynamics/Aind.Behavior.VrForaging
2
closed
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Allow null WebCamera controller
This contribution was made on Mar 4
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Consider making
Updaters
' keys an EnumThis contribution was made on Mar 3
AllenNeuralDynamics/Aind.Behavior.ForceForaging
1
open
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Implement aind-data-mappers
This contribution was made on Mar 24
bonsai-rx/bonsai
1
closed
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Allow multi-line editor for
String
operatorThis contribution was made on Mar 24
AllenNeuralDynamics/aind-file-standards
1
open
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Make
device.yml
required as part of the harp logging standardThis contribution was made on Mar 24
AllenNeuralDynamics/aind-data-transfer-service
1
open
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Add documentation for edge cases and job settings
This contribution was made on Mar 20
AllenNeuralDynamics/Aind.Behavior.CurriculumTemplate
1
open
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Make a cli template
This contribution was made on Mar 19
harp-tech/device.behavior
1
open
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Document higher bound of pwm frequency
This contribution was made on Mar 12
AllenNeuralDynamics/Aind.Behavior.VideoEncodingBenchmarks
1
open
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Add cli entry point for qc
This contribution was made on Mar 11
Started 2 discussions in 1 repository
harp-tech/protocol
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SRM Notes for 27-03-2025
This contribution was made on Mar 26
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SRM Notes for 20-03-2025
This contribution was made on Mar 19
Answered 2 discussions in 1 repository
bonsai-rx/bonsai
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Conditional timer to increase or decrease value
This contribution was made on Mar 15
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Evaulating the efficiency of a workflow
This contribution was made on Mar 3