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@bowang-lab

WangLab @ U of T

BoWang's Lab at University of Toronto

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  1. MedSAM MedSAM Public

    Segment Anything in Medical Images

    Jupyter Notebook 2.9k 396

  2. scGPT scGPT Public

    Jupyter Notebook 1k 196

  3. U-Mamba U-Mamba Public

    U-Mamba: Enhancing Long-range Dependency for Biomedical Image Segmentation

    Python 663 60

  4. Graph-Mamba Graph-Mamba Public

    Graph-Mamba: Towards Long-Range Graph Sequence Modelling with Selective State Spaces

    Python 219 28

  5. MedSAMSlicer MedSAMSlicer Public

    3D Slicer Plugin for Segment anything in medical images

    Python 154 18

  6. joint-ner-and-re joint-ner-and-re Public

    This repository contains the corpora and supplementary data, along with instructions for recreating the experiments, for our paper: "End-to-end Named Entity Recognition and Relation Extraction usin…

    Jupyter Notebook 91 14

Repositories

Showing 10 of 44 repositories
  • bowang-lab/csc413-2024’s past year of commit activity
    Jupyter Notebook 1 MIT 2 0 0 Updated Oct 19, 2024
  • MedSAMSlicer Public

    3D Slicer Plugin for Segment anything in medical images

    bowang-lab/MedSAMSlicer’s past year of commit activity
    Python 154 18 1 0 Updated Oct 18, 2024
  • Orthrus Public

    Orthrus is a mature RNA model for RNA property prediction. It uses a mamba encoder backbone, a variant of state-space models specifically designed for long-sequence data, such as RNA.

    bowang-lab/Orthrus’s past year of commit activity
    Python 26 MIT 3 2 0 Updated Oct 18, 2024
  • MedSAM Public

    Segment Anything in Medical Images

    bowang-lab/MedSAM’s past year of commit activity
    Jupyter Notebook 2,900 Apache-2.0 396 8 2 Updated Oct 10, 2024
  • AMOS-MM-Solution Public

    Solution to the AMOS-MM challenge

    bowang-lab/AMOS-MM-Solution’s past year of commit activity
    Python 4 MIT 0 0 0 Updated Sep 14, 2024
  • IntegrAO Public

    Integrate Any Omics: Towards genome-wide data integration for patient stratification

    bowang-lab/IntegrAO’s past year of commit activity
    Jupyter Notebook 6 MIT 2 0 0 Updated Sep 13, 2024
  • ECG-FM Public

    An electrocardiogram analysis foundation model.

    bowang-lab/ECG-FM’s past year of commit activity
    Jupyter Notebook 77 MIT 4 1 0 Updated Sep 13, 2024
  • bowang-lab/genomic-FM’s past year of commit activity
    Python 17 2 1 0 Updated Aug 27, 2024
  • AGILE Public

    AGILE Platform: A Deep Learning-Powered Approach to Accelerate LNP Development for mRNA Delivery

    bowang-lab/AGILE’s past year of commit activity
    Python 27 MIT 3 2 0 Updated Aug 21, 2024
  • scGPT Public
    bowang-lab/scGPT’s past year of commit activity
    Jupyter Notebook 1,009 MIT 196 110 7 Updated Aug 1, 2024

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