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  1. bioinfologics/sdg bioinfologics/sdg Public

    Sequence Distance Graph framework: graph + reads + mapping + analysis

    C++ 25 6

  2. TGAC/KAT TGAC/KAT Public

    The K-mer Analysis Toolkit (KAT) contains a number of tools that analyse and compare K-mer spectra.

    C++ 210 52

  3. bioinfologics/w2rap-contigger bioinfologics/w2rap-contigger Public

    An Illumina PE genome contig assembler, can handle large (17Gbp) complex (hexaploid) genomes.

    C++ 44 14

  4. bioinfologics/satsuma2 bioinfologics/satsuma2 Public

    FFT cross-correlation based synteny aligner, (re)designed to make full use of parallel computing

    C++ 41 13