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Minor improvement and bug fixes
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@litaifang litaifang released this 27 Jul 05:35
· 1496 commits to master since this release
v2.2.2
a6cb0ac
  • Got around an occasional unexplained issue in then ada package were the SOR is sometimes categorized as type, by forcing it to be numeric.
  • Changed defaults PASS score (i.e., probability value) from 0.7 to 0.5, and make them configurable in the SomaticSeq.Wrapper.sh script (i.e., --pass-threshold 0.5 and --lowqual-threshold 0.1).
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