khmer
v3 does not work the same as v2 and is incompatible
#53444
+2
−2
Add this suggestion to a batch that can be applied as a single commit.
This suggestion is invalid because no changes were made to the code.
Suggestions cannot be applied while the pull request is closed.
Suggestions cannot be applied while viewing a subset of changes.
Only one suggestion per line can be applied in a batch.
Add this suggestion to a batch that can be applied as a single commit.
Applying suggestions on deleted lines is not supported.
You must change the existing code in this line in order to create a valid suggestion.
Outdated suggestions cannot be applied.
This suggestion has been applied or marked resolved.
Suggestions cannot be applied from pending reviews.
Suggestions cannot be applied on multi-line comments.
Suggestions cannot be applied while the pull request is queued to merge.
Suggestion cannot be applied right now. Please check back later.
primerForge does not work with
khmer
v3. I do not know what has changed between versions, but it does not generate the same results it used to.khmer
v2.1 does work. I have restricted the build to reflect this.@mencian the recipes for both
primerforge 1.5.2-0
andprimerforge 1.5.3-0
are broken because of this incompatibility. It passes the bioconda recipe checks, but the unit tests fail.related to #48898 and #53433