The scipy.linalg function triu was removed in SciPy 1.13
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To import `from karateclub import GraphReader` it is necessary to import `from scipy.linalg import triu` (see the Traceback bellow):
```
(.venv) ± python scripts/karate.py
Traceback (most recent call last):
File "/path/to/project/scripts/karate.py", line 2, in <module>
from karateclub import GraphReader
File "/path/to/project/.venv/lib/python3.11/site-packages/karateclub/__init__.py", line 2, in <module>
from karateclub.node_embedding import *
File "/path/to/project/.venv/lib/python3.11/site-packages/karateclub/node_embedding/__init__.py", line 1, in <module>
from .neighbourhood import *
File "/path/to/project/.venv/lib/python3.11/site-packages/karateclub/node_embedding/neighbourhood/__init__.py", line 2, in <module>
from .deepwalk import DeepWalk
File "/path/to/project/.venv/lib/python3.11/site-packages/karateclub/node_embedding/neighbourhood/deepwalk.py", line 3, in <module>
from gensim.models.word2vec import Word2Vec
File "/path/to/project/.venv/lib/python3.11/site-packages/gensim/__init__.py", line 11, in <module>
from gensim import parsing, corpora, matutils, interfaces, models, similarities, utils # noqa:F401
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/path/to/project/.venv/lib/python3.11/site-packages/gensim/corpora/__init__.py", line 6, in <module>
from .indexedcorpus import IndexedCorpus # noqa:F401 must appear before the other classes
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/path/to/project/.venv/lib/python3.11/site-packages/gensim/corpora/indexedcorpus.py", line 14, in <module>
from gensim import interfaces, utils
File "/path/to/project/.venv/lib/python3.11/site-packages/gensim/interfaces.py", line 19, in <module>
from gensim import utils, matutils
File "/path/to/project/.venv/lib/python3.11/site-packages/gensim/matutils.py", line 20, in <module>
from scipy.linalg import get_blas_funcs, triu
ImportError: cannot import name 'triu' from 'scipy.linalg' (/path/to/project/.venv/lib/python3.11/site-packages/scipy/linalg/__init__.py)
User at Device in /path/to/project on main!
```
But since the `scipy.linalg` function `triu` was removed in SciPy 1.13, to make it work, we need "scipy<1.13". Therefore the modification on the `setup.py` file.
See details on this StackOverflow question:
https://stackoverflow.com/questions/78279136/importerror-cannot-import-name-triu-from-scipy-linalg-when-importing-gens
|
Ok, starting CI |
|
Do you happen to be able to reproduce the CI error on your end? |
|
Resolved separately, closing. |
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To import
from karateclub import GraphReaderit is necessary to importfrom scipy.linalg import triu(see the Traceback bellow):But since the
scipy.linalgfunctiontriuwas removed in SciPy 1.13, to make it work, we need "scipy<1.13". Therefore the modification on thesetup.pyfile.See details on this StackOverflow question:
https://stackoverflow.com/questions/78279136/importerror-cannot-import-name-triu-from-scipy-linalg-when-importing-gens