A curated list of papers and official code implementations for the MICCAI 2025 conference, updated automatically.
This repository automatically discovers and organizes MICCAI 2025 papers from arXiv that have publicly available code implementations. The list is updated daily by a bot that searches for new papers and categorizes them by research area.
- How to Contribute
- Segmentation
- Reconstruction
- Classification
- Image Registration
- Domain Adaptation
- Generative Models
- General
Contributions are welcome! While this list is automatically maintained by a bot that searches arXiv for MICCAI 2025 papers, we appreciate human oversight to ensure quality and completeness.
Ways to contribute:
- 🐛 Report errors: If you find incorrect links, misclassified papers, or other issues, please open an issue
- 📝 Add missing papers: If you know of a MICCAI 2025 paper with code that the bot missed, please open a pull request
- 🏷️ Suggest better categorization: If you think a paper is in the wrong category, let us know
- 💡 Propose new categories: If you see papers that don't fit existing categories, suggest new ones
Before contributing:
- Check if the paper is actually accepted to MICCAI 2025
- Ensure the code repository is publicly accessible
- Verify the links are working
This list is automatically generated. See any issues? Please open a pull request!
- SSL-MedSAM2: A Semi-supervised Medical Image Segmentation Framework Powered by Few-shot Learning of SAM2 - Code
- MICCAI STSR 2025 Challenge: Semi-Supervised Teeth and Pulp Segmentation and CBCT-IOS Registration - Code
- Augment to Augment: Diverse Augmentations Enable Competitive Ultra-Low-Field MRI Enhancement - Code
- Benchmark-Ready 3D Anatomical Shape Classification - Code
- MeisenMeister: A Simple Two Stage Pipeline for Breast Cancer Classification on MRI - Code
- Domain-Specialized Interactive Segmentation Framework for Meningioma Radiotherapy Planning - Code
- Segmentor-Guided Counterfactual Fine-Tuning for Locally Coherent and Targeted Image Synthesis - Code
- U-Mamba2-SSL for Semi-Supervised Tooth and Pulp Segmentation in CBCT - Code
- Anomaly Detection by Clustering DINO Embeddings using a Dirichlet Process Mixture - Code
- Zero-shot Monocular Metric Depth for Endoscopic Images - Code
- The Missing Piece: A Case for Pre-Training in 3D Medical Object Detection - Code
- Consistent View Alignment Improves Foundation Models for 3D Medical Image Segmentation - Code
- U-Mamba2: Scaling State Space Models for Dental Anatomy Segmentation in CBCT - Code
- Modality-Agnostic Input Channels Enable Segmentation of Brain lesions in Multimodal MRI with Sequences Unavailable During Training - Code
- UltrON: Ultrasound Occupancy Networks - Code
- SimCroP: Radiograph Representation Learning with Similarity-driven Cross-granularity Pre-training - Code
- XOCT: Enhancing OCT to OCTA Translation via Cross-Dimensional Supervised Multi-Scale Feature Learning - Code
- Co-Seg: Mutual Prompt-Guided Collaborative Learning for Tissue and Nuclei Segmentation - Code
- E-BayesSAM: Efficient Bayesian Adaptation of SAM with Self-Optimizing KAN-Based Interpretation for Uncertainty-Aware Ultrasonic Segmentation - Code
- Tooth-Diffusion: Guided 3D CBCT Synthesis with Fine-Grained Tooth Conditioning - Code
This list is automatically generated. See any issues? Please open a pull request!
- US-X Complete: A Multi-Modal Approach to Anatomical 3D Shape Recovery - Code
- Benchmark-Ready 3D Anatomical Shape Classification - Code
- The Missing Piece: A Case for Pre-Training in 3D Medical Object Detection - Code
- UltrON: Ultrasound Occupancy Networks - Code
- XOCT: Enhancing OCT to OCTA Translation via Cross-Dimensional Supervised Multi-Scale Feature Learning - Code
- Neural Proteomics Fields for Super-resolved Spatial Proteomics Prediction - Code
- Tooth-Diffusion: Guided 3D CBCT Synthesis with Fine-Grained Tooth Conditioning - Code
- HierAdaptMR: Cross-Center Cardiac MRI Reconstruction with Hierarchical Feature Adapters - Code
- Cross-view Generalized Diffusion Model for Sparse-view CT Reconstruction - Code
This list is automatically generated. See any issues? Please open a pull request!
- Benchmark-Ready 3D Anatomical Shape Classification - Code
- MeisenMeister: A Simple Two Stage Pipeline for Breast Cancer Classification on MRI - Code
- Adaptive Stain Normalization for Cross-Domain Medical Histology - Code
- SpurBreast: A Curated Dataset for Investigating Spurious Correlations in Real-world Breast MRI Classification - Code
- Segmentor-Guided Counterfactual Fine-Tuning for Locally Coherent and Targeted Image Synthesis - Code
- High-Order Progressive Trajectory Matching for Medical Image Dataset Distillation - Code
- U-Mamba2-SSL for Semi-Supervised Tooth and Pulp Segmentation in CBCT - Code
- Anomaly Detection by Clustering DINO Embeddings using a Dirichlet Process Mixture - Code
- Learning Contrastive Multimodal Fusion with Improved Modality Dropout for Disease Detection and Prediction - Code
- CardiacCLIP: Video-based CLIP Adaptation for LVEF Prediction in a Few-shot Manner - Code
- The Missing Piece: A Case for Pre-Training in 3D Medical Object Detection - Code
- More performant and scalable: Rethinking contrastive vision-language pre-training of radiology in the LLM era - Code
- U-Mamba2: Scaling State Space Models for Dental Anatomy Segmentation in CBCT - Code
- Robust Fetal Pose Estimation across Gestational Ages via Cross-Population Augmentation - Code
- Invisible Attributes, Visible Biases: Exploring Demographic Shortcuts in MRI-based Alzheimer's Disease Classification - Code
- Modality-Agnostic Input Channels Enable Segmentation of Brain lesions in Multimodal MRI with Sequences Unavailable During Training - Code
- SimCroP: Radiograph Representation Learning with Similarity-driven Cross-granularity Pre-training - Code
- XOCT: Enhancing OCT to OCTA Translation via Cross-Dimensional Supervised Multi-Scale Feature Learning - Code
- Leveraging Generic Foundation Models for Multimodal Surgical Data Analysis - Code
- PRECISE-AS: Personalized Reinforcement Learning for Efficient Point-of-Care Echocardiography in Aortic Stenosis Diagnosis - Code
- OccluNet: Spatio-Temporal Deep Learning for Occlusion Detection on DSA - Code
- Tooth-Diffusion: Guided 3D CBCT Synthesis with Fine-Grained Tooth Conditioning - Code
- FIND-Net -- Fourier-Integrated Network with Dictionary Kernels for Metal Artifact Reduction - Code
This list is automatically generated. See any issues? Please open a pull request!
- ProtoEFNet: Dynamic Prototype Learning for Inherently Interpretable Ejection Fraction Estimation in Echocardiography - Code
- MICCAI STSR 2025 Challenge: Semi-Supervised Teeth and Pulp Segmentation and CBCT-IOS Registration - Code
- US-X Complete: A Multi-Modal Approach to Anatomical 3D Shape Recovery - Code
- Flip Distribution Alignment VAE for Multi-Phase MRI Synthesis - Code
- SpurBreast: A Curated Dataset for Investigating Spurious Correlations in Real-world Breast MRI Classification - Code
- Zero-shot Monocular Metric Depth for Endoscopic Images - Code
- The Missing Piece: A Case for Pre-Training in 3D Medical Object Detection - Code
- Consistent View Alignment Improves Foundation Models for 3D Medical Image Segmentation - Code
- More performant and scalable: Rethinking contrastive vision-language pre-training of radiology in the LLM era - Code
- Robust Fetal Pose Estimation across Gestational Ages via Cross-Population Augmentation - Code
- Invisible Attributes, Visible Biases: Exploring Demographic Shortcuts in MRI-based Alzheimer's Disease Classification - Code
- SimCroP: Radiograph Representation Learning with Similarity-driven Cross-granularity Pre-training - Code
- XOCT: Enhancing OCT to OCTA Translation via Cross-Dimensional Supervised Multi-Scale Feature Learning - Code
- Neural Proteomics Fields for Super-resolved Spatial Proteomics Prediction - Code
- Gaussian Primitive Optimized Deformable Retinal Image Registration - Code
- OccluNet: Spatio-Temporal Deep Learning for Occlusion Detection on DSA - Code
- Deep Biomechanically-Guided Interpolation for Keypoint-Based Brain Shift Registration - Code
This list is automatically generated. See any issues? Please open a pull request!
- Adaptive Stain Normalization for Cross-Domain Medical Histology - Code
- SpurBreast: A Curated Dataset for Investigating Spurious Correlations in Real-world Breast MRI Classification - Code
- Disentanglement of Biological and Technical Factors via Latent Space Rotation in Clinical Imaging Improves Disease Pattern Discovery - Code
- Leveraging Generic Foundation Models for Multimodal Surgical Data Analysis - Code
- Tooth-Diffusion: Guided 3D CBCT Synthesis with Fine-Grained Tooth Conditioning - Code
- HierAdaptMR: Cross-Center Cardiac MRI Reconstruction with Hierarchical Feature Adapters - Code
This list is automatically generated. See any issues? Please open a pull request!
- SSL-MedSAM2: A Semi-supervised Medical Image Segmentation Framework Powered by Few-shot Learning of SAM2 - Code
- MICCAI STSR 2025 Challenge: Semi-Supervised Teeth and Pulp Segmentation and CBCT-IOS Registration - Code
- Benchmark-Ready 3D Anatomical Shape Classification - Code
- Flip Distribution Alignment VAE for Multi-Phase MRI Synthesis - Code
- Segmentor-Guided Counterfactual Fine-Tuning for Locally Coherent and Targeted Image Synthesis - Code
- U-Mamba2-SSL for Semi-Supervised Tooth and Pulp Segmentation in CBCT - Code
- Tooth-Diffusion: Guided 3D CBCT Synthesis with Fine-Grained Tooth Conditioning - Code
- Cross-view Generalized Diffusion Model for Sparse-view CT Reconstruction - Code
- Deep Learning Enables Large-Scale Shape and Appearance Modeling in Total-Body DXA Imaging - Code
This list is automatically generated. See any issues? Please open a pull request!
- MedPAO: A Protocol-Driven Agent for Structuring Medical Reports - Code
- EchoingECG: An Electrocardiogram Cross-Modal Model for Echocardiogram Tasks - Code
- Exploring Pre-training Across Domains for Few-Shot Surgical Skill Assessment - Code
- Multi-modal Knowledge Decomposition based Online Distillation for Biomarker Prediction in Breast Cancer Histopathology - Code
Repository Topics: awesome, awesome-list, miccai, miccai2025, medical-imaging, deep-learning, computer-vision, segmentation, reconstruction, classification, medical-image-analysis, artificial-intelligence
Last Updated: 2025-12-15 08:33 UTC by GitHub Actions
License: Apache License 2.0