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1. GISAIDR GISAIDR Public

   Programmatically interact with the GISAID database.

   R 72 9

2. beastiary beastiary Public

   Real time and remote MCMC trace monitoring with BEASTIARY.

   Vue 20 2

3. write-the write-the Public

   AI-powered Documentation and Test Generation Tool

   Python 99 13

4. python-friends/auto-scope python-friends/auto-scope Public

   An open source whole slide scanner and automated cell discrimination and counting system.

   Jupyter Notebook 6

5. clockor2/clockor2 clockor2/clockor2 Public

   Inferring global and local strict molecular clocks using root-to-tip regression

   TypeScript 11

6. snk snk Public

   Snakemake workflow management system and CLI generation tool

   Python 50 3