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…NSE and fix NAMESPACE.
…n get_allele_counts
…al (#24) * Fix: corrected parameter in get_allele_counts() in preprocess_rrbs_normal() * Fix: corrected parameter in preprocess_rrbs_normal() * Added messages for each step
… Selects OT/OB and overlapping paired end reads with reduced dependency on exact BAM flags from Bismark.
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pipeline()function to enable WGBS and RRBS from one entrypoint..count..) was deprecated in ggplot2 3.4.0. #13