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This wiki is intended to document vcfdist for both users and developers.

If you have any questions, ideas, or feedback: please open a new discussion.

If you found a bug or have a feature request: please submit an issue.

For information on vcfdist updates: check the latest releases.

If you use vcfdist in your research, please cite the following pre-print:

Tim Dunn and Satish Narayanasamy. “vcfdist: Accurately benchmarking phased small variant calls in human genomes”. In: bioRxiv (2023). DOI: 10.1101/2023.03.10.532078. URL: https://www.biorxiv.org/content/10.1101/2023.03.10.532078v2

@article {dunn2023vcfdist,
    author = {Dunn, Tim and Narayanasamy, Satish},
    title = {vcfdist: Accurately benchmarking phased small variant calls in human genomes},
    elocation-id = {2023.03.10.532078},
    year = {2023},
    doi = {10.1101/2023.03.10.532078},
    publisher = {Cold Spring Harbor Laboratory},
    URL = {https://www.biorxiv.org/content/10.1101/2023.03.10.532078v2},
    journal = {bioRxiv}
}

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