[Sweep GHA Fix] The GitHub Actions run failed with... #8
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Description
This pull request includes the following changes:
.flake8
file to increase themax-line-length
from 100 to 200.Makefile
to remove the@
symbol before the commands in theformat
andformat-check
targets.openoligo/api/helpers.py
file to change the import statement for theSynthesisTask
model.openoligo/api/helpers.py
file to change the function names and update the database queries to use theSynthesisTask
model instead of theSynthesisQueue
model.openoligo/api/models.py
file to add new enums (InstrumentHealth
,Backbone
,Nucleobase
,Sugar
,SolidSupport
) and a new dataclass (NucleobaseInfo
).openoligo/api/models.py
file to change the import statement for theSynthesisTask
model.openoligo/api/models.py
file to add new fields and validators to theNucleotide
model.openoligo/api/models.py
file to change the name of theSynthesisQueue
model toSynthesisTask
and update the field names and types accordingly.openoligo/api/models.py
file to change the import statement for theSynthesisTask
model.openoligo/api/redis.py
file to remove the unused imports and update theget_redis
function to return thered
object directly.openoligo/hal/board.py
file to change the import statement for theNoSuchPinInPinout
exception.openoligo/hal/instrument.py
file to change the import statement for theOneDestinationException
andOneSourceException
exceptions.openoligo/hal/platform.py
file to change the import statement for theNoSuchPinInPinout
exception.openoligo/hal/types.py
file to change the import statement for theNoSuchPinInPinout
exception and update the names of theOneDestinationException
andOneSourceException
exceptions.openoligo/scripts/runner.py
file to change the import statement for theSynthesisQueue
model.openoligo/scripts/server.py
file to change the import statement for theSynthesisQueue
model and update the/health
endpoint to return theInstrumentHealth.OPERATIONAL
status.openoligo/scripts/server.py
file to change the import statement for theSynthesisQueue
model and update the/queue
endpoints to use theSynthesisTask
model.openoligo/utils/singleton.py
file to remove the unused import.openoligo/utils/wait.py
file to remove the unused imports.pyproject.toml
file to remove the unused dependencies and add theruff
package.setup.py
file to add a description and update the version number.tests/api/test_helpers.py
file to change the import statement for theSynthesisQueue
model.tests/api/test_models.py
file to change the import statement for theSynthesisQueue
model and update the tests to use theSynthesisTask
model.tests/api/test_server.py
file to change the import statement for theSynthesisQueue
model.tests/hal/test_instrument.py
file to change the import statement for theOneDestinationException
andOneSourceException
exceptions.