This repository is organized as follows:
simulations/: materials for reproducing the simulation study.application/: materials for reproducing the FinHER clinical trial analysis.
The simulation results can be reproduced by running
simulations/meals_obs-continuous.R, simulations/R/meals_obs-binary.R and
simulations/R/meals_rct-survival.R. We recommend using high performance
computing (HPC) environment. Mock bash scripts are made available in
simulations/slurm/ for use with an HPC environment using SLURM workload
manager.
The FinHER clinical trial data analysis can be performed by running
application/R/analysis.Rmd.