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1. CoexpressDeconvolve CoexpressDeconvolve Public

   Perform Visium Standard Definition (SD) spot deconvolution into putative single cells using distance-based gene clustering and cell type formulation.

   Jupyter Notebook 6

2. TCRscape TCRscape Public

   TCRscape - a tool for simultaneous multimodal gene expression and clonotype analysis of single T-cells profiled via the BD Rhapsody system.

   Jupyter Notebook 4 1

3. ErythroOrigin ErythroOrigin Public

   Predict human Erythroid cell tissue of origin using the BD Rhapsody single cell Immune responce panel gene expression data

   Jupyter Notebook

4. IsoCaller-scFAST-seq-SeekOneDD IsoCaller-scFAST-seq-SeekOneDD Public

   Extract isoform-level gene expression data from raw SeekOne DD scFAST-seq FASTQ files

   Jupyter Notebook