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Dear author, thanks for your development of such great methods to do differential abundance analysis.
I try to use this method for my data, but I couldn't run STGmarkerFinder() function properly.
My code is
2021-12-17 08:11:14.670028: W tensorflow/core/framework/op_kernel.cc:1692] OP_REQUIRES failed at cwise_ops_common.h:128 : Resource exhausted: OOM when allocating tensor with shape[24364,2000] and type float on /job:localhost/replica:0/task:0/device:CPU:0 by allocator cpu
Error in py_call_impl(callable, dots$args, dots$keywords) :
ResourceExhaustedError: OOM when allocating tensor with shape[24364,2000] and type float on /job:localhost/replica:0/task:0/device:CPU:0 by allocator cpu
[[node gates/clip_by_value (defined at :221) ]]
Hint: If you want to see a list of allocated tensors when OOM happens, add report_tensor_allocations_upon_oom to RunOptions for current allocation info. This isn't available when running in Eager mode.
Errors may have originated from an input operation.
Input Source operations connected to node gates/clip_by_value:
gates/Const (defined at :203)
Original stack trace for 'gates/clip_by_value':
File "", line 49, in STG_FS
File "", line 116, in init
File "", line 234, in feature_selector
File "", line 221, in hard_sigmoid
File "/home/caolei/.local/lib/python3.6/site-packages/tensorflow/python/util/dispatch.py", line 206, in wrapper
return target(*args, **kwargs)
File "/home/caolei/.local/lib/python3.6/site-pac
Dear author, thanks for your development of such great methods to do differential abundance analysis.
I try to use this method for my data, but I couldn't run STGmarkerFinder() function properly.
My code is
But I get the error message
Do you know how to figure it out ? Do you need any more detailed information?
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