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  • Yale University

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HuihongLi/README.md

Hi, I'm Huihong Li 👋

M.S. student in Computational Biology and Biomedical Informatics at Yale University.

Research Interests

Biological Systems Modeling, Neural Networks, Multi Omics

Publications

  • Li, H. et al. "Genome-wide consensus transcriptional signatures identify synaptic pruning linking Alzheimer's disease and epilepsy." Molecular Psychiatry, 2025
  • Li, H. et al. "Reconstruction of 1,979 prokaryotic metagenome-assembled genomes from 37 global cave environments." Scientific Data, 2025
  • Li, H. & McDougal, R.A. "Local homeostatic scaling supports stable rate propagation under noise and heterogeneity." bioRxiv, 2025
  • Li, H. et al. "Temporal Dynamics Dominates Microbiome and Resistome Assembly Despite Tetracycline Pressure in a Germfree Lettuce Model." 2025.

Popular repositories Loading

  1. HuihongLi HuihongLi Public

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    A web application for analyzing gene overlaps between different modules across datasets. This tool enables researchers to identify statistically significant overlaps between gene modules from their…

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  3. CaveMAGs CaveMAGs Public

    The first prokaryotic cave metagenomic catalog from 37 geographical diverse cave environments. We employed an optimized genome reconstruction pipeline to recover 3,837 medium-to-high quality cave m…

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