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GPU support for linear filtering options. #139

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39aba0c
get rid of hera_sim requirements.
aewallwi Sep 17, 2021
3a07be4
remove plot data nb.
aewallwi Sep 17, 2021
7b8ab62
import uvdata.
aewallwi Sep 17, 2021
c59e34d
import data path.
aewallwi Sep 17, 2021
c2bf86e
import os
aewallwi Sep 17, 2021
92b7752
get rid of sim reference.
aewallwi Sep 17, 2021
41b40ff
really get rid of sim.
aewallwi Sep 17, 2021
8d9ecf2
added missing data set.
aewallwi Sep 17, 2021
d1ab5a8
avoid computing dpss functions twice.
aewallwi Sep 15, 2021
4da930a
put in missing indices.
aewallwi Sep 15, 2021
7db7fd9
make sure that vectors are actually calculated.
aewallwi Sep 15, 2021
1996982
use correct fn.
aewallwi Sep 15, 2021
da488b7
deal with potential -1 degeneracy in tests.
aewallwi Sep 15, 2021
a21d485
use twice fundamental period for consistency.
aewallwi Sep 16, 2021
6b871ad
fix fop test.
aewallwi Sep 17, 2021
653eaaf
adding tensorflow options.
aewallwi Sep 21, 2021
9295203
adding tensorflow functionality.
aewallwi Sep 21, 2021
a364e33
add tensorflow req to setup.py.
aewallwi Sep 21, 2021
fe10977
Merge branch 'main' into gpu_support
aewallwi Sep 21, 2021
6b5fe3a
continuing to try to get dpss recipe right.
aewallwi Sep 21, 2021
d738a95
Merge branch 'gpu_support' of https://github.com/HERA-Team/uvtools in…
aewallwi Sep 21, 2021
a729db7
fix tensorflow dpss operator.
aewallwi Sep 21, 2021
6e72b8f
add req for 2.6.0 for tridiag
aewallwi Sep 21, 2021
47dd0c4
pin numpy version in environment.yml
aewallwi Sep 21, 2021
c40e397
add eigh_sinc method.
aewallwi Sep 22, 2021
3fe3dae
pass use tensorflow to fit_matrix.
aewallwi Sep 22, 2021
62d45c8
make sure to store solution matrix as numpy arrya.
aewallwi Sep 22, 2021
980bc85
only support real design matrices and weights for tf mode.
aewallwi Sep 22, 2021
96326bc
simplify fit_solution_matrix tf.
aewallwi Sep 28, 2021
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10 changes: 5 additions & 5 deletions README.md
Original file line number Diff line number Diff line change
Expand Up @@ -12,15 +12,15 @@ If you use `conda` (preferred), then you may wish to install the following packa
manually before installing `uvtools` (if you don't have them already)::

$ conda install -c conda-forge numpy scipy "aipy>=3.0rc2"
If you are developing `uvtools`, you will also require `nose` and `pyuvdata` to run

If you are developing `uvtools`, you will also require `pytest` and `pyuvdata` to run
tests. All of these packages can be installed with the following commands::

$ conda create -n uvtools python=3
$ conda activate uvtools
$ conda env update -n uvtools -f environment.yml
$ pip install -e .
$ pip install -e .

To test the package, execute the following command::

$ nosetests uvtools/tests/test_dspec.py uvtools/tests/test_utils.py
$ nosetests uvtools/tests/test_dspec.py uvtools/tests/test_utils.py
2 changes: 1 addition & 1 deletion environment.yml
Original file line number Diff line number Diff line change
Expand Up @@ -5,6 +5,6 @@ channels:
dependencies:
- aipy>=3.0rc2
- nose
- numpy
- numpy~=1.19.3
- pyuvdata
- scipy
1 change: 1 addition & 0 deletions setup.py
Original file line number Diff line number Diff line change
Expand Up @@ -40,6 +40,7 @@ def package_files(package_dir, subdirectory):
'numpy',
'six',
'scipy',
"tensorflow>=2.6.0",
],
'extras_require': {'aipy':['aipy>=3.0rc2']}
}
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