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FlyBase

A Database of Drosophila Genes & Genomes

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  1. drosophila-anatomy-developmental-ontology drosophila-anatomy-developmental-ontology Public

    The home of the Drosophila anatomy ontology

    Jupyter Notebook 18 6

  2. react-sequence-viewer react-sequence-viewer Public

    A React wrapper around the BioJS sequence-viewer component

    JavaScript 8 2

  3. react-ontology-ribbon react-ontology-ribbon Public

    A React component for generating a heatmap type display for GO slims.

    JavaScript 6 4

  4. bulkfile-scripts bulkfile-scripts Public

    Scripts useful for working with bulk FlyBase data locally.

    Perl 3 5

  5. flybase-controlled-vocabulary flybase-controlled-vocabulary Public

    The home of the FlyBase miscellaneous ontologies - incorporating the Drosophila Phenotype Ontology (see also FlyBase/drosophila-phenotype-ontology)

    Shell 9 5

  6. chado chado Public

    Chado related code for FlyBase

    PLpgSQL 1

Repositories

Showing 10 of 51 repositories
  • alliance-linkml-flybase Public

    Code for export of FlyBase data to the Alliance LinkML-based persistent store.

    FlyBase/alliance-linkml-flybase’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Oct 30, 2024
  • flybase-ontology-scripts Public

    Scripts for working with FlyBase ontologies, currently mostly for report generation.

    FlyBase/flybase-ontology-scripts’s past year of commit activity
    Python 0 MIT 1 0 0 Updated Oct 30, 2024
  • drosophila-anatomy-developmental-ontology Public

    The home of the Drosophila anatomy ontology

    FlyBase/drosophila-anatomy-developmental-ontology’s past year of commit activity
    Jupyter Notebook 18 CC-BY-4.0 6 13 0 Updated Oct 30, 2024
  • harvdev-peeves-parser Public

    Stripped down peeves for testing ONLY. May be destroyed later. To run on tests to get idea of peeves messages.

    FlyBase/harvdev-peeves-parser’s past year of commit activity
    Perl 0 0 0 0 Updated Oct 23, 2024
  • harvdev-bulk-reports Public

    Generate bulk reports for FlyBase curators, users and collaborators.

    FlyBase/harvdev-bulk-reports’s past year of commit activity
    Perl 0 MIT 0 0 0 Updated Oct 22, 2024
  • flybase-controlled-vocabulary Public

    The home of the FlyBase miscellaneous ontologies - incorporating the Drosophila Phenotype Ontology (see also FlyBase/drosophila-phenotype-ontology)

    FlyBase/flybase-controlled-vocabulary’s past year of commit activity
    Shell 9 CC-BY-4.0 5 0 0 Updated Oct 21, 2024
  • drosophila-phenotype-ontology Public

    The home of the Drosophila phenotype ontology

    FlyBase/drosophila-phenotype-ontology’s past year of commit activity
    Makefile 4 CC-BY-4.0 1 22 0 Updated Oct 21, 2024
  • drosophila-developmental-ontology Public

    The home of the Drosophila developmental ontology, an ontology of Drosophila melanogaster developmental stages.

    FlyBase/drosophila-developmental-ontology’s past year of commit activity
    Makefile 4 CC-BY-4.0 0 0 0 Updated Oct 21, 2024
  • harvdev-proforma-testdb Public

    Repository for creation and loading of the proforma test database.

    FlyBase/harvdev-proforma-testdb’s past year of commit activity
    PLpgSQL 2 MIT 0 0 0 Updated Oct 8, 2024
  • cytoscape-widget Public

    A React based FlyBase wrapper around Cytoscape for displaying network plots.

    FlyBase/cytoscape-widget’s past year of commit activity
    JavaScript 1 MIT 1 0 1 Updated Oct 4, 2024
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