Force set --offline if no database setup #1797
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When we do not provide
--databaseor--cacheVEP does not setup database connection just like--offline. But some part of the code is not aware of this fact and tries to connect to database and fails.An example is when VEP is used with
--gffand--fastaand provided with input that contains variant ids which does not work without database. VEP will fail with message -Which is misleading. Also VEP should not try to connect to database in this scenario.
In this PR we force set
--offlineif no database setup is made.