switch to marginaleffects #63
Workflow file for this run
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| on: | |
| push: | |
| branches: | |
| - main | |
| pull_request: | |
| branches: | |
| - main | |
| name: R-CMD-check | |
| jobs: | |
| R-CMD-check: | |
| runs-on: ${{ matrix.config.os }} | |
| name: ${{ matrix.config.os }} (${{ matrix.config.r }}) | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| config: | |
| - {os: macOS-latest, r: 'devel'} | |
| - {os: macOS-latest, r: 'release'} | |
| - {os: macOS-latest, r: 'oldrel'} | |
| - {os: windows-latest, r: 'devel'} | |
| - {os: windows-latest, r: 'release'} | |
| - {os: windows-latest, r: 'oldrel'} | |
| - {os: ubuntu-latest, r: 'devel'} | |
| - {os: ubuntu-latest, r: 'release'} | |
| - {os: ubuntu-latest, r: 'oldrel'} | |
| env: | |
| R_REMOTES_NO_ERRORS_FROM_WARNINGS: true | |
| RSPM: ${{ matrix.config.rspm }} | |
| R_FUTURE_PLAN: ${{ matrix.config.future_plan }} | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - uses: r-lib/actions/setup-r@v2 | |
| with: | |
| r-version: ${{ matrix.config.r }} | |
| - uses: r-lib/actions/setup-pandoc@v2 | |
| - name: Query dependencies | |
| run: | | |
| install.packages('remotes') | |
| saveRDS(remotes::dev_package_deps(dependencies = TRUE), ".github/depends.Rds", version = 2) | |
| shell: Rscript {0} | |
| - name: Cache R packages | |
| if: runner.os != 'Windows' | |
| uses: actions/cache@v3 | |
| with: | |
| path: ${{ env.R_LIBS_USER }} | |
| key: ${{ runner.os }}-r-${{ matrix.config.r }}-1-${{ hashFiles('.github/depends.Rds') }} | |
| restore-keys: ${{ runner.os }}-r-${{ matrix.config.r }}-1- | |
| # - name: "[Linux] Install required system libs" | |
| # if: runner.os == 'Linux' | |
| # run: sudo apt install libcurl4-openssl-dev libgit2-dev | |
| # | |
| # - name: "[Custom block] [Linux] Install spatial libraries" | |
| # if: runner.os == 'Linux' | |
| # run: sudo apt-get install libgdal-dev libproj-dev libgeos-dev libudunits2-dev | |
| # Try to automatically check for system dependencies and install them | |
| # Note: this might not catch all required system libs and manual action might be needed | |
| # - name: "[Stage] [Linux] Install linux system dependencies" | |
| # if: runner.os == 'Linux' | |
| # run: | | |
| # while read -r cmd | |
| # do | |
| # eval sudo $cmd | |
| # done < <(Rscript -e 'writeLines(remotes::system_requirements("ubuntu", "20.04"))') | |
| - name: Install dependencies | |
| run: | | |
| remotes::install_deps(dependencies = TRUE) | |
| remotes::install_cran("rcmdcheck") | |
| shell: Rscript {0} | |
| # # this section again is for sf | |
| # - name: Install rgdal with configure | |
| # if: runner.os == 'macOS' | |
| # run: | | |
| # install.packages("rgdal", type = "source", configure.args = "--with-proj-lib=/usr/local/lib/ --with-proj-include=/usr/local/include/") | |
| # shell: Rscript {0} | |
| - name: Check | |
| env: | |
| _R_CHECK_CRAN_INCOMING_: false | |
| run: rcmdcheck::rcmdcheck(args = c("--no-manual", "--as-cran"), error_on = "warning", check_dir = "check") | |
| shell: Rscript {0} | |
| - name: Upload check results | |
| if: failure() | |
| uses: actions/upload-artifact@v3 | |
| with: | |
| name: ${{ runner.os }}-r${{ matrix.config.r }}-results | |
| path: check |