Disclaimer

This code repository is no longer being actively managed by the Data To Insight Center at Indiana University Bloomington. Neither the center nor its principals assume responsibility for vulnerabilities that the code may have acquired over time.

SEAD 2.0 Publishing Services

Source repository for SEAD 2.0 publishing services. SEAD 2.0 is funded in large part by a grant from the National Science Foundation. The primary components of the SEAD 2.0 suite are: Curbee: a lightweight publishing workflow; PDT: a mongoDB repository of People, Data, Things used by the publishing services; SEAD Matchmaker: recommendation tool that selects repositories for deposit using information from PDT; services suite for a hybrid HPC storage server/repository that accepts deposits from the SEAD services. Used to develop IU SEAD Cloud at Indiana University, and a test HPC storage server/repository solution that runs at the National Data Service at NCSA.

Be on the lookout for a reorganization of this source code repository Fall 2016 for easier use of the component pieces of the SEAD 2.0 publishing services.

Steps to build:

1. Checkout the Curbee repository from Github

git clone https://github.com/Data-to-Insight-Center/Curbee.git

2. Move the to root directory and execute following command.

mvn clean install -DskipTests

Skipping tests will help as there's an intermittent test failure in sead-doi-service

This should build all modules needed for the SEAD services.

Steps to deploy on Tomcat:

1. Copy the following .war files from relevant target directories into TOMCAT_HOME/webapps.

sead-c3pr.war
sead-dataone.war
sead-doi-service.war
va-workflow.war
metadata-gen.war
sead-mon.war

2. Fix the endpoint URL's in following configuration files under webapps.

sead-c3pr/WEB-INF/classes/org/sead/api/util/default.properties
sead-dataone/WEB-INF/classes/org/sead/va/dataone/util/default.properties
sead-doi-service/WEB-INF/classes/org/seadva/services/util/doi.properties
va-workflow/WEB-INF/classes/org/sead/workflow/sead-wf.xml
metadata-gen/WEB-INF/classes/org/seadva/metadatagen/util/Config.properties
sead-mon/WEB-INF/classes/org/sead/monitoring/ui/util/default.properties

3. Add a setenv.sh file under bin (if it's not already there) and set the -Dorg.apache.tomcat.util.buf.UDecoder.ALLOW_ENCODED_SLASH=true parameter to make sure the encoded URL requests work fine.

Ex:

export JAVA_OPTS="-Xss1024m -Xms512m -Xmx4096m -XX:MaxPermSize=2048m -Dorg.apache.tomcat.util.buf.UDecoder.ALLOW_ENCODED_SLASH=true -Dorg.apache.catalina.connector.CoyoteAdapter.ALLOW_BACKSLASH=true"

4. If SEAD should run on https, follow the guide below to setup SSL on Tomcat. Make sure that you use Sun JDK instead of OpenJDK if you need SSL.

Ex: https://tomcat.apache.org/tomcat-7.0-doc/ssl-howto.html

5. Start the server.

Now the API should be accessible through the following URL.

http://host:port/sead-c3pr/api/..

For more details on how to use the API, please refer to:

https://opensource.ncsa.illinois.edu/confluence/pages/viewpage.action?pageId=71139377

Full documentation of Curbee API is available at http://seadva-test.d2i.indiana.edu/sead-c3pr/index.html