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@10XGenomics

10x Genomics

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  1. cellranger Public

    10x Genomics Single Cell Analysis

    Rust 398 96

  2. loupeR Public

    Convert Seurat objects to 10x Genomics Loupe files.

    R 118 15

  3. spaceranger Public

    Rust 6 1

Repositories

Showing 10 of 71 repositories
  • intel-mkl-src Public Forked from rust-math/intel-mkl-src

    Redistribute Intel MKL as a crate

    Rust 1 24 0 2 Updated Apr 18, 2025
  • orbit Public

    Rust wrapper for STAR aligner

    C 17 MIT 3 0 4 Updated Apr 14, 2025
  • spaceranger Public
    Rust 6 1 1 2 Updated Apr 10, 2025
  • image-analysis-rs Public
    Rust 0 0 0 2 Updated Apr 10, 2025
  • zarr Public Forked from preyasshah/zarr

    Rust implementation of the Zarr N-dimensional array format.

    Rust 1 Apache-2.0 5 0 1 Updated Apr 8, 2025
  • analysis_guides Public

    10x Genomics analysis guides files

    Jupyter Notebook 8 10 1 0 Updated Mar 27, 2025
  • bamtofastq Public

    Convert 10x BAM files to the original FASTQs compatible with 10x pipelines

    Rust 62 MIT 7 17 13 Updated Mar 25, 2025
  • rules_conda Public

    Bazel rules for creating conda environments

    Go 5 MIT 1 3 2 Updated Mar 24, 2025
  • rkm Public Forked from genbattle/rkm

    Generic k-means implementation written in Rust

    Rust 0 9 0 0 Updated Mar 20, 2025
  • HumanColonCancer_VisiumHD Public

    Associated code to the manuscript "Characterization of immune cell populations in the tumor microenvironment of colorectal cancer using high definition spatial profiling"

    R 62 4 1 0 Updated Mar 19, 2025
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