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halo_common.f90
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halo_common.f90
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!=======================================================================
! This is part of the 2DECOMP&FFT library
!
! 2DECOMP&FFT is a software framework for general-purpose 2D (pencil)
! decomposition. It also implements a highly scalable distributed
! three-dimensional Fast Fourier Transform (FFT).
!
! Copyright (C) 2009-2011 Ning Li, the Numerical Algorithms Group (NAG)
!
!=======================================================================
! This file contain common code to be included by subroutines
! 'update_halo_...' in halo.f90
if (present(opt_decomp)) then
decomp = opt_decomp
else
decomp = decomp_main
end if
if (present(opt_global)) then
global = opt_global
else
global = .false.
end if
s1 = size(in,1)
s2 = size(in,2)
s3 = size(in,3)
! Calculate the starting index and ending index of output
if (s1==decomp%xsz(1)) then ! X-pencil input
if (global) then
xs = decomp%xst(1)
xe = decomp%xen(1)
ys = decomp%xst(2) - level
ye = decomp%xen(2) + level
zs = decomp%xst(3) - level
ze = decomp%xen(3) + level
else
xs = 1
xe = s1
ys = 1 - level
ye = s2 + level
zs = 1 - level
ze = s3 + level
end if
else if (s2==decomp%ysz(2)) then ! Y-pencil input
if (global) then
xs = decomp%yst(1) - level
xe = decomp%yen(1) + level
ys = decomp%yst(2)
ye = decomp%yen(2)
zs = decomp%yst(3) - level
ze = decomp%yen(3) + level
else
xs = 1 - level
xe = s1 + level
ys = 1
ye = s2
zs = 1 - level
ze = s3 + level
end if
else if (s3==decomp%zsz(3)) then ! Z-pencil input
if (global) then
xs = decomp%zst(1) - level
xe = decomp%zen(1) + level
ys = decomp%zst(2) - level
ye = decomp%zen(2) + level
zs = decomp%zst(3)
ze = decomp%zen(3)
else
xs = 1 - level
xe = s1 + level
ys = 1 - level
ye = s2 + level
zs = 1
ze = s3
end if
else
! invalid input
call decomp_2d_abort(10, &
'Invalid data passed to update_halo')
end if
allocate(out(xs:xe, ys:ye, zs:ze))
! out = -1.0_mytype ! fill the halo for debugging
! copy input data to output
if (global) then
! using global coordinate
! note the input array passed in always has index starting from 1
! need to work out the corresponding global index
if (s1==decomp%xsz(1)) then
do k=decomp%xst(3),decomp%xen(3)
do j=decomp%xst(2),decomp%xen(2)
do i=1,s1 ! x all local
out(i,j,k) = in(i,j-decomp%xst(2)+1,k-decomp%xst(3)+1)
end do
end do
end do
else if (s2==decomp%ysz(2)) then
do k=decomp%yst(3),decomp%yen(3)
do j=1,s2 ! y all local
do i=decomp%yst(1),decomp%yen(1)
out(i,j,k) = in(i-decomp%yst(1)+1,j,k-decomp%yst(3)+1)
end do
end do
end do
else if (s3==decomp%zsz(3)) then
do k=1,s3 ! z all local
do j=decomp%zst(2),decomp%zen(2)
do i=decomp%zst(1),decomp%zen(1)
out(i,j,k) = in(i-decomp%zst(1)+1,j-decomp%zst(2)+1,k)
end do
end do
end do
end if
else
! not using global coordinate
do k=1,s3
do j=1,s2
do i=1,s1
out(i,j,k) = in(i,j,k)
end do
end do
end do
end if
! If needed, define MPI derived data type to pack halo data,
! then call MPI send/receive to exchange halo data
!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!
! X-pencil
if (s1==decomp%xsz(1)) then
#ifdef HALO_DEBUG
if (nrank==4) then
write(*,*) 'X-pencil input'
write(*,*) '=============='
write(*,*) 'Data on a y-z plane is shown'
write(*,*) 'Before halo exchange'
do j=ye,ys,-1
write(*,'(10F4.0)') (out(1,j,k),k=zs,ze)
end do
end if
#endif
! *** east/west ***
! all data in local memory already, no halo exchange
! *** north/south ***
tag_s = coord(1)
if (coord(1)==dims(1)-1 .AND. periodic_y) then
tag_n = 0
else
tag_n = coord(1) + 1
end if
icount = s3 + 2*level
ilength = level * s1
ijump = s1*(s2+2*level)
call MPI_TYPE_VECTOR(icount, ilength, ijump, &
data_type, halo12, ierror)
call MPI_TYPE_COMMIT(halo12, ierror)
! receive from south
call MPI_IRECV(out(xs,ys,zs), 1, halo12, &
neighbour(1,4), tag_s, DECOMP_2D_COMM_CART_X, &
requests(1), ierror)
! receive from north
call MPI_IRECV(out(xs,ye-level+1,zs), 1, halo12, &
neighbour(1,3), tag_n, DECOMP_2D_COMM_CART_X, &
requests(2), ierror)
! send to south
call MPI_ISSEND(out(xs,ys+level,zs), 1, halo12, &
neighbour(1,4), tag_s, DECOMP_2D_COMM_CART_X, &
requests(3), ierror)
! send to north
call MPI_ISSEND(out(xs,ye-level-level+1,zs), 1, halo12, &
neighbour(1,3), tag_n, DECOMP_2D_COMM_CART_X, &
requests(4), ierror)
call MPI_WAITALL(4, requests, status, ierror)
call MPI_TYPE_FREE(halo12, ierror)
#ifdef HALO_DEBUG
if (nrank==4) then
write(*,*) 'After exchange in Y'
do j=ye,ys,-1
write(*,'(10F4.0)') (out(1,j,k),k=zs,ze)
end do
end if
#endif
! *** top/bottom ***
! no need to define derived data type as data on xy-planes
! all contiguous in memory, which can be sent/received using
! MPI directly
tag_b = coord(2)
if (coord(2)==dims(2)-1 .AND. periodic_z) then
tag_t = 0
else
tag_t = coord(2) + 1
end if
icount = (s1 * (s2+2*level)) * level
! receive from bottom
call MPI_IRECV(out(xs,ys,zs), icount, data_type, &
neighbour(1,6), tag_b, DECOMP_2D_COMM_CART_X, &
requests(1), ierror)
! receive from top
call MPI_IRECV(out(xs,ys,ze-level+1), icount, data_type, &
neighbour(1,5), tag_t, DECOMP_2D_COMM_CART_X, &
requests(2), ierror)
! send to bottom
call MPI_ISSEND(out(xs,ys,zs+level), icount, data_type, &
neighbour(1,6), tag_b, DECOMP_2D_COMM_CART_X, &
requests(3), ierror)
! send to top
call MPI_ISSEND(out(xs,ys,ze-level-level+1), icount, data_type, &
neighbour(1,5), tag_t, DECOMP_2D_COMM_CART_X, &
requests(4), ierror)
call MPI_WAITALL(4, requests, status, ierror)
#ifdef HALO_DEBUG
if (nrank==4) then
write(*,*) 'After exchange in Z'
do j=ye,ys,-1
write(*,'(10F4.0)') (out(1,j,k),k=zs,ze)
end do
end if
#endif
!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!
! Y-pencil
else if (s2==decomp%ysz(2)) then
#ifdef HALO_DEBUG
if (nrank==4) then
write(*,*) 'Y-pencil input'
write(*,*) '=============='
write(*,*) 'Data on a x-z plane is shown'
write(*,*) 'Before halo exchange'
do i=xe,xs,-1
write(*,'(10F4.0)') (out(i,1,k),k=zs,ze)
end do
end if
#endif
! *** east/west ***
tag_w = coord(1)
if (coord(1)==dims(1)-1 .AND. periodic_x) then
tag_e = 0
else
tag_e = coord(1) + 1
end if
icount = s2*(s3+2*level)
ilength = level
ijump = s1+2*level
call MPI_TYPE_VECTOR(icount, ilength, ijump, &
data_type, halo21, ierror)
call MPI_TYPE_COMMIT(halo21, ierror)
! receive from west
call MPI_IRECV(out(xs,ys,zs), 1, halo21, &
neighbour(2,2), tag_w, DECOMP_2D_COMM_CART_Y, &
requests(1), ierror)
! receive from east
call MPI_IRECV(out(xe-level+1,ys,zs), 1, halo21, &
neighbour(2,1), tag_e, DECOMP_2D_COMM_CART_Y, &
requests(2), ierror)
! send to west
call MPI_ISSEND(out(xs+level,ys,zs), 1, halo21, &
neighbour(2,2), tag_w, DECOMP_2D_COMM_CART_Y, &
requests(3), ierror)
! send to east
call MPI_ISSEND(out(xe-level-level+1,ys,zs), 1, halo21, &
neighbour(2,1), tag_e, DECOMP_2D_COMM_CART_Y, &
requests(4), ierror)
call MPI_WAITALL(4, requests, status, ierror)
call MPI_TYPE_FREE(halo21, ierror)
#ifdef HALO_DEBUG
if (nrank==4) then
write(*,*) 'After exchange in X'
do i=xe,xs,-1
write(*,'(10F4.0)') (out(i,1,k),k=zs,ze)
end do
end if
#endif
! *** north/south ***
! all data in local memory already, no halo exchange
! *** top/bottom ***
! no need to define derived data type as data on xy-planes
! all contiguous in memory, which can be sent/received using
! MPI directly
tag_b = coord(2)
if (coord(2)==dims(2)-1 .AND. periodic_z) then
tag_t = 0
else
tag_t = coord(2) + 1
end if
icount = (s2 * (s1+2*level)) * level
! receive from bottom
call MPI_IRECV(out(xs,ys,zs), icount, data_type, &
neighbour(2,6), tag_b, DECOMP_2D_COMM_CART_Y, &
requests(1), ierror)
! receive from top
call MPI_IRECV(out(xs,ys,ze-level+1), icount, data_type, &
neighbour(2,5), tag_t, DECOMP_2D_COMM_CART_Y, &
requests(2), ierror)
! send to bottom
call MPI_ISSEND(out(xs,ys,zs+level), icount, data_type, &
neighbour(2,6), tag_b, DECOMP_2D_COMM_CART_Y, &
requests(3), ierror)
! send to top
call MPI_ISSEND(out(xs,ys,ze-level-level+1), icount, data_type, &
neighbour(2,5), tag_t, DECOMP_2D_COMM_CART_Y, &
requests(4), ierror)
call MPI_WAITALL(4, requests, status, ierror)
#ifdef HALO_DEBUG
if (nrank==4) then
write(*,*) 'After exchange in Z'
do i=xe,xs,-1
write(*,'(10F4.0)') (out(i,1,k),k=zs,ze)
end do
end if
#endif
!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!
! Z-pencil
else if (s3==decomp%zsz(3)) then
#ifdef HALO_DEBUG
if (nrank==4) then
write(*,*) 'Z-pencil input'
write(*,*) '=============='
write(*,*) 'Data on a x-y plane is shown'
write(*,*) 'Before halo exchange'
do i=xe,xs,-1
write(*,'(10F4.0)') (out(i,j,1),j=ys,ye)
end do
end if
#endif
! *** east/west ***
tag_w = coord(1)
if (coord(1)==dims(1)-1 .AND. periodic_x) then
tag_e = 0
else
tag_e = coord(1) + 1
end if
icount = (s2+2*level)*s3
ilength = level
ijump = s1+2*level
call MPI_TYPE_VECTOR(icount, ilength, ijump, &
data_type, halo31, ierror)
call MPI_TYPE_COMMIT(halo31, ierror)
! receive from west
call MPI_IRECV(out(xs,ys,zs), 1, halo31, &
neighbour(3,2), tag_w, DECOMP_2D_COMM_CART_Z, &
requests(1), ierror)
! receive from east
call MPI_IRECV(out(xe-level+1,ys,zs), 1, halo31, &
neighbour(3,1), tag_e, DECOMP_2D_COMM_CART_Z, &
requests(2), ierror)
! send to west
call MPI_ISSEND(out(xs+level,ys,zs), 1, halo31, &
neighbour(3,2), tag_w, DECOMP_2D_COMM_CART_Z, &
requests(3), ierror)
! send to east
call MPI_ISSEND(out(xe-level-level+1,ys,zs), 1, halo31, &
neighbour(3,1), tag_e, DECOMP_2D_COMM_CART_Z, &
requests(4), ierror)
call MPI_WAITALL(4, requests, status, ierror)
call MPI_TYPE_FREE(halo31, ierror)
#ifdef HALO_DEBUG
if (nrank==4) then
write(*,*) 'After exchange in X'
do i=xe,xs,-1
write(*,'(10F4.0)') (out(i,j,1),j=ys,ye)
end do
end if
#endif
! *** north/south ***
tag_s = coord(2)
if (coord(2)==dims(2)-1 .AND. periodic_y) then
tag_n = 0
else
tag_n = coord(2) + 1
end if
icount = s3
ilength = level * (s1+2*level)
ijump = (s1+2*level) * (s2+2*level)
call MPI_TYPE_VECTOR(icount, ilength, ijump, &
data_type, halo32, ierror)
call MPI_TYPE_COMMIT(halo32, ierror)
! receive from south
call MPI_IRECV(out(xs,ys,zs), 1, halo32, &
neighbour(3,4), tag_s, DECOMP_2D_COMM_CART_Z, &
requests(1), ierror)
! receive from north
call MPI_IRECV(out(xs,ye-level+1,zs), 1, halo32, &
neighbour(3,3), tag_n, DECOMP_2D_COMM_CART_Z, &
requests(2), ierror)
! send to south
call MPI_ISSEND(out(xs,ys+level,zs), 1, halo32, &
neighbour(3,4), tag_s, DECOMP_2D_COMM_CART_Z, &
requests(3), ierror)
! send to north
call MPI_ISSEND(out(xs,ye-level-level+1,zs), 1, halo32, &
neighbour(3,3), tag_n, DECOMP_2D_COMM_CART_Z, &
requests(4), ierror)
call MPI_WAITALL(4, requests, status, ierror)
call MPI_TYPE_FREE(halo32, ierror)
#ifdef HALO_DEBUG
if (nrank==4) then
write(*,*) 'After exchange in Y'
do i=xe,xs,-1
write(*,'(10F4.0)') (out(i,j,1),j=ys,ye)
end do
end if
#endif
! *** top/bottom ***
! all data in local memory already, no halo exchange
end if ! pencil